RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 CEP63Q96MT8 703 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 COL4A3BPQ9Y5P4 624 aa3.9□□□□□ -1.78
ATM-203ENST00000452508 CTAGE15A4D2H0 777 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 CTAGE8P0CG41 777 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 MAPK4P31152 587 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 GSTA5Q7RTV2 222 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 CTAGE6Q86UF2 777 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 CTAGE4Q8IX94 777 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 SYNE4Q8N205 404 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ZKSCAN3Q9BRR0 538 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 C1orf112Q9NSG2 853 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 IPPQ9Y573 584 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 AKAP12Q02952 1782 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 MANSC4A6NHS7 340 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 E7EVH7 732 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 KIAA0391O15091 583 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 EFCAB14O75071 495 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 TMEM191BP0C7N4 346 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ATP5JP18859 108 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 TAF1CQ15572 869 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 ELOA2Q8IYF1 753 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 FSIP1Q8NA03 581 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PPP1R14BQ96C90 147 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 TCEANC2Q96MN5 208 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ESYT2A0FGR8 921 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 KRT5P13647 590 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 NAA20P61599 178 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PURAQ00577 322 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 SUSD4Q5VX71 490 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 STMN2Q93045 179 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PLEKHA4Q9H4M7 779 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ARMT1Q9H993 441 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 TESPA1A2RU30 521 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 ARHGAP6O43182 974 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 CCT2P78371 535 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 LETM2Q2VYF4 491 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 RSRC2Q7L4I2 434 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 MCPH1Q8NEM0 835 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ZBTB9Q96C00 473 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 CDK5RAP1Q96SZ6 601 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 C2orf40Q9H1Z8 148 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 AKT3Q9Y243 479 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PXDNQ92626 1479 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 AP3B1O00203 1094 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 MAP3K10Q02779 954 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PEX6Q13608 980 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 SKIV2LQ15477 1246 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 DOK7Q18PE1 504 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 FAM212AQ96EL1 285 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 SNX25Q9H3E2 840 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 SAP30BPQ9UHR5 308 aaKnown RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 SLC4A7Q9Y6M7 1214 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 MYOM1P52179 1685 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 SYCE3A1L190 88 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ZRANB2O95218 330 aaKnown RBP eCLIP3.9□□□□□ -1.79
ATM-203ENST00000452508 GJB2P29033 226 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 AP3M2P53677 418 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 LMBRD2Q68DH5 695 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 NEK10Q6ZWH5 1172 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 MARCH10Q8NA82 808 aaPredicted RBP3.9□□□□□ -1.79
ATM-203ENST00000452508 GRK7Q8WTQ7 553 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 TSSK1BQ9BXA7 367 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ECT2Q9H8V3 914 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 ZC4H2Q9NQZ6 224 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 C8orf4Q9NR00 106 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 DNAI1Q9UI46 699 aa3.9□□□□□ -1.79
ATM-203ENST00000452508 COL3A1P02461 1466 aaPredicted RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 TNPO2O14787 897 aaKnown RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 CHMLP26374 656 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 ZNF445P59923 1031 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 TUBA4AP68366 448 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 KRT17Q04695 432 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 PPARAQ07869 468 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 ADRM1Q16186 407 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 TTC31Q49AM3 519 aaPredicted RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 TRIM4Q9C037 500 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 BHMT2Q9H2M3 363 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 SLIT3O75094 1523 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 GSPT1P15170 499 aaKnown RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 VEGFAP15692 232 aaPredicted RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 AP1ARQ63HQ0 302 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 RINT1Q6NUQ1 792 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 MAP7D3Q8IWC1 876 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 IFT20Q8IY31 132 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 CYTH2Q99418 400 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 SEL1LQ9UBV2 794 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 CHMP2BQ9UQN3 213 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 CYP19A1P11511 503 aaPredicted RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 SENP1Q9P0U3 644 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 RBM8AQ9Y5S9 174 aaKnown RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 CIB2O75838 187 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 SASH1O94885 1247 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 CFBP00751 764 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 EEF2P13639 858 aaKnown RBP3.89□□□□□ -1.79
ATM-203ENST00000452508 MCM7P33993 719 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 BTDP43251 543 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 UBE3CQ15386 1083 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 TGFBRAP1Q8WUH2 860 aa3.89□□□□□ -1.79
ATM-203ENST00000452508 ASZ1Q8WWH4 475 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms