RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RASGRP4Q8TDF6 673 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 AFG1LQ8WV93 481 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 CRYGNQ8WXF5 182 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 CDHR1Q96JP9 859 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 FAM161BQ96MY7 647 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 ALG1Q9BT22 464 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 JADE2Q9NQC1 790 aa22.76■■□□□ 1.23
COL9A3-202ENST00000452372 CDH23Q9H251 3354 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 A0A0U1RQG5 324 aaPredicted RBP22.75■■□□□ 1.23
COL9A3-202ENST00000452372 KPNA6O60684 536 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 GGPS1O95749 300 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 CD4P01730 458 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 SMAD3P84022 425 aaKnown RBP22.75■■□□□ 1.23
COL9A3-202ENST00000452372 ARHGAP4P98171 946 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 FPGSQ05932 587 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 NEDD9Q14511 834 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 NPY5RQ15761 445 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 BLIDQ8IZY5 108 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 VTI1AQ96AJ9 217 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 SENP7Q9BQF6 1050 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 MXRA8Q9BRK3 442 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 PHF20Q9BVI0 1012 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 SEMA6BQ9H3T3 888 aa22.75■■□□□ 1.23
COL9A3-202ENST00000452372 UNC80Q8N2C7 3258 aa22.74■■□□□ 1.23
COL9A3-202ENST00000452372 CYP3A4P08684 503 aa22.74■■□□□ 1.23
COL9A3-202ENST00000452372 MCM2P49736 904 aa22.74■■□□□ 1.23
COL9A3-202ENST00000452372 PURAQ00577 322 aaKnown RBP22.74■■□□□ 1.23
COL9A3-202ENST00000452372 CEP55Q53EZ4 464 aa22.74■■□□□ 1.23
COL9A3-202ENST00000452372 TTYH1Q9H313 450 aaPredicted RBP22.74■■□□□ 1.23
COL9A3-202ENST00000452372 KCNJ14Q9UNX9 436 aa22.74■■□□□ 1.23
COL9A3-202ENST00000452372 M0R2N6 131 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 CD2BP2O95400 341 aaKnown RBP22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MMP3P08254 477 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MYL3P08590 195 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MTMR1Q13613 665 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MFSD5Q6N075 450 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 GIMAP8Q8ND71 665 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-202ENST00000452372 PPTC7Q8NI37 304 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 CYP2W1Q8TAV3 490 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MTG1Q9BT17 334 aaPredicted RBP22.73■■□□□ 1.23
COL9A3-202ENST00000452372 BCAS3Q9H6U6 928 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MLXIPQ9HAP2 919 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 GJB4Q9NTQ9 266 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 MROH7Q68CQ1 1323 aa22.73■■□□□ 1.23
COL9A3-202ENST00000452372 EYSQ5T1H1 3165 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 MEIS1O00470 390 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 PPFIA4O75335 1185 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 ZNF76P36508 570 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 DGKDQ16760 1214 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 METTL7BQ6UX53 244 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 SPATA33Q96N06 139 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 SEZ6LQ9BYH1 1024 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 KCNH7Q9NS40 1196 aa22.72■■□□□ 1.23
COL9A3-202ENST00000452372 ATP9AO75110 1047 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 HOXD8P13378 290 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-202ENST00000452372 KCNA2P16389 499 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 HSDL1Q3SXM5 330 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 ZNF697Q5TEC3 545 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 CYFIP1Q7L576 1253 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 NIPA1Q7RTP0 329 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 RNPC3Q96LT9 517 aaKnown RBP22.71■■□□□ 1.23
COL9A3-202ENST00000452372 CDX2Q99626 313 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-202ENST00000452372 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.71■■□□□ 1.238e-13■□□□□ 10.4
COL9A3-202ENST00000452372 PRUNE2Q8WUY3 3088 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 DOCK5Q9H7D0 1870 aa22.71■■□□□ 1.23
COL9A3-202ENST00000452372 MYO9BQ13459 2157 aa22.7■■□□□ 1.23
COL9A3-202ENST00000452372 FAM86B1E9PN63 330 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 SORBS3O60504 671 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 FAM86B2P0C5J1 330 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 CIITAP33076 1130 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 USP11P51784 963 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 HMGN5P82970 282 aaKnown RBP22.7■■□□□ 1.22
COL9A3-202ENST00000452372 ITGA7Q13683 1181 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 TMX3Q96JJ7 454 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 SCN10AQ9Y5Y9 1956 aa22.7■■□□□ 1.22
COL9A3-202ENST00000452372 EDIL3O43854 480 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 ARP10275 920 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 CSF2RAP15509 400 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 PSMC6P62333 389 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 TMEM240Q5SV17 173 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 RASIP1Q5U651 963 aa22.69■■□□□ 1.22
COL9A3-202ENST00000452372 IGLV3-22A0A075B6J6 115 aa22.68■■□□□ 1.22
COL9A3-202ENST00000452372 KRT25Q7Z3Z0 450 aa22.68■■□□□ 1.22
COL9A3-202ENST00000452372 PLA2G4DQ86XP0 818 aa22.68■■□□□ 1.22
COL9A3-202ENST00000452372 TBCKQ8TEA7 893 aa22.68■■□□□ 1.22
COL9A3-202ENST00000452372 TRPV6Q9H1D0 765 aa22.68■■□□□ 1.22
COL9A3-202ENST00000452372 AGO4Q9HCK5 861 aaKnown RBP22.68■■□□□ 1.22
COL9A3-202ENST00000452372 DLL1O00548 723 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 NOP56O00567 594 aaKnown RBP22.67■■□□□ 1.22
COL9A3-202ENST00000452372 CYP2C18P33260 490 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 TRIM29Q14134 588 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 NONOQ15233 471 aaKnown RBP eCLIP22.67■■□□□ 1.22
COL9A3-202ENST00000452372 KRT40Q6A162 431 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 OXER1Q8TDS5 423 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 KAT2BQ92831 832 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 GPR20Q99678 358 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 PPP1R12CQ9BZL4 782 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 PKD2L1Q9P0L9 805 aa22.67■■□□□ 1.22
COL9A3-202ENST00000452372 NFASCO94856 1347 aa22.66■■□□□ 1.22
COL9A3-202ENST00000452372 UMODL1Q5DID0 1318 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms