RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZNF174Q15697 407 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 RILPL1Q5EBL4 403 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 DHX37Q8IY37 1157 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 UPF3AQ9H1J1 476 aaKnown RBP27.27■■□□□ 1.96
CPSF4-207ENST00000451876 OGDHLQ9ULD0 1010 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 Q9Y3F1 56 aa27.27■■□□□ 1.96
CPSF4-207ENST00000451876 C6orf222P0C671 652 aaPredicted RBP27.26■■□□□ 1.95
CPSF4-207ENST00000451876 NEDD9Q14511 834 aa27.26■■□□□ 1.95
CPSF4-207ENST00000451876 KCNMB3Q9NPA1 279 aa27.26■■□□□ 1.95
CPSF4-207ENST00000451876 DHX15O43143 795 aaKnown RBP27.25■■□□□ 1.95
CPSF4-207ENST00000451876 NEMFO60524 1076 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 BRD1O95696 1058 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 F13A1P00488 732 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 BEX3Q00994 111 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 HSDL1Q3SXM5 330 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 METTL7BQ6UX53 244 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 MLXIPQ9HAP2 919 aa27.25■■□□□ 1.95
CPSF4-207ENST00000451876 MYCNP04198 464 aaPredicted RBP27.24■■□□□ 1.95
CPSF4-207ENST00000451876 HAS1Q92839 578 aa27.24■■□□□ 1.95
CPSF4-207ENST00000451876 SLC5A5Q92911 643 aa27.24■■□□□ 1.95
CPSF4-207ENST00000451876 EMID1Q96A84 441 aaPredicted RBP27.24■■□□□ 1.95
CPSF4-207ENST00000451876 AP5M1Q9H0R1 490 aa27.24■■□□□ 1.95
CPSF4-207ENST00000451876 TMEM60Q9H2L4 133 aa27.24■■□□□ 1.95
CPSF4-207ENST00000451876 ZSCAN16Q9H4T2 348 aaPredicted RBP27.24■■□□□ 1.95
CPSF4-207ENST00000451876 DDX39AO00148 427 aaKnown RBP27.23■■□□□ 1.95
CPSF4-207ENST00000451876 SP4Q02446 784 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 LRRC41Q15345 812 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 AFG1LQ8WV93 481 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 NFASCO94856 1347 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 WDR81Q562E7 1941 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 NKX3-2P78367 333 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 LAMC2Q13753 1193 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 FSCN1Q16658 493 aaKnown RBP27.23■■□□□ 1.95
CPSF4-207ENST00000451876 GIMAP8Q8ND71 665 aaPredicted RBP27.23■■□□□ 1.95
CPSF4-207ENST00000451876 SPATA33Q96N06 139 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 SDF4Q9BRK5 362 aa27.23■■□□□ 1.95
CPSF4-207ENST00000451876 JPH1Q9HDC5 661 aaPredicted RBP27.23■■□□□ 1.95
CPSF4-207ENST00000451876 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.23■■□□□ 1.95
CPSF4-207ENST00000451876 TFRCP02786 760 aaKnown RBP27.22■■□□□ 1.95
CPSF4-207ENST00000451876 KLHDC9Q8NEP7 349 aa27.22■■□□□ 1.95
CPSF4-207ENST00000451876 FTOQ9C0B1 505 aaKnown RBP eCLIP27.22■■□□□ 1.95
CPSF4-207ENST00000451876 SPC25Q9HBM1 224 aa27.22■■□□□ 1.95
CPSF4-207ENST00000451876 A6NJR5 290 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 PSMD10O75832 226 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 MMP3P08254 477 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 CALCRLQ16602 461 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 GNASQ5JWF2 1037 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 LRCH2Q5VUJ6 765 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 CCSAPQ6IQ19 270 aaPredicted RBP27.21■■□□□ 1.95
CPSF4-207ENST00000451876 PPTC7Q8NI37 304 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 MTMR9Q96QG7 549 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 SLC9A2Q9UBY0 812 aa27.21■■□□□ 1.95
CPSF4-207ENST00000451876 CCDC85CA6NKD9 419 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 TBX3O15119 743 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 CCNE2O96020 404 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 EN2P19622 333 aaPredicted RBP27.2■■□□□ 1.95
CPSF4-207ENST00000451876 CST5P28325 142 aaPredicted RBP27.2■■□□□ 1.95
CPSF4-207ENST00000451876 MNX1P50219 401 aaPredicted RBP27.2■■□□□ 1.95
CPSF4-207ENST00000451876 ORC2Q13416 577 aaPredicted RBP27.2■■□□□ 1.95
CPSF4-207ENST00000451876 RNF180Q86T96 592 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 C4orf32Q8N8J7 132 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 IPO9Q96P70 1041 aaKnown RBP27.2■■□□□ 1.95
CPSF4-207ENST00000451876 RIT2Q99578 217 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 TBC1D22BQ9NU19 505 aa27.2■■□□□ 1.95
CPSF4-207ENST00000451876 CPT1AP50416 773 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 SOX10P56693 466 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 FOXD4L6Q3SYB3 417 aaPredicted RBP27.19■■□□□ 1.94
CPSF4-207ENST00000451876 FOXD4L3Q6VB84 417 aaPredicted RBP27.19■■□□□ 1.94
CPSF4-207ENST00000451876 FAM20AQ96MK3 541 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 GPR20Q99678 358 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 GAS7O60861 476 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 PTGDRQ13258 359 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 ARRDC4Q8NCT1 418 aa27.19■■□□□ 1.94
CPSF4-207ENST00000451876 DNM1LO00429 736 aa27.18■■□□□ 1.94
CPSF4-207ENST00000451876 NOP56O00567 594 aaKnown RBP27.18■■□□□ 1.94
CPSF4-207ENST00000451876 KCNA10Q16322 511 aa27.18■■□□□ 1.94
CPSF4-207ENST00000451876 TEKT3Q9BXF9 490 aa27.18■■□□□ 1.94
CPSF4-207ENST00000451876 VAV3Q9UKW4 847 aa27.18■■□□□ 1.94
CPSF4-207ENST00000451876 CLIC4Q9Y696 253 aa27.18■■□□□ 1.94
CPSF4-207ENST00000451876 OR52Z1P0C646 297 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 ACTR2P61160 394 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 SF3A1Q15459 793 aaKnown RBP27.17■■□□□ 1.94
CPSF4-207ENST00000451876 SLFN12Q8IYM2 578 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 DIS3LQ8TF46 1054 aaKnown RBP27.17■■□□□ 1.94
CPSF4-207ENST00000451876 USP28Q96RU2 1077 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 UNC45AQ9H3U1 944 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 TCHHQ07283 1943 aa27.17■■□□□ 1.94
CPSF4-207ENST00000451876 GSTTP1A0A1W2PQM5 241 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 CHMP2AO43633 222 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 MARCH6O60337 910 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 ASGR1P07306 291 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 HOXD8P13378 290 aaPredicted RBP27.16■■□□□ 1.94
CPSF4-207ENST00000451876 TXKP42681 527 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 B3GNT9Q6UX72 402 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 ELP1O95163 1332 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 TCF7P36402 384 aaPredicted RBP27.16■■□□□ 1.94
CPSF4-207ENST00000451876 CEBPZQ03701 1054 aaKnown RBP27.16■■□□□ 1.94
CPSF4-207ENST00000451876 SPIRE1Q08AE8 756 aa27.16■■□□□ 1.94
CPSF4-207ENST00000451876 TTC12Q9H892 705 aaPredicted RBP27.16■■□□□ 1.94
CPSF4-207ENST00000451876 SCN10AQ9Y5Y9 1956 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms