RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 RIMS2Q9UQ26 1411 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 ATP7BP35670 1465 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 DLC1Q96QB1 1528 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 A0A0G2JLL6 359 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 RFXAPO00287 272 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 KIF3BO15066 747 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 TRIM13O60858 407 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 POLR2BP30876 1174 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 PRKAR2BP31323 418 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 HSPA4P34932 840 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 IL13P35225 146 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 EIF4A3P38919 411 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 NEK4P51957 841 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 EPHB3P54753 998 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 TERF2Q15554 542 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 CWF19L2Q2TBE0 894 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 TWISTNBQ3B726 338 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 FBXO33Q7Z6M2 555 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 TMEM151BQ8IW70 566 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 KIF18AQ8NI77 898 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 IPO4Q8TEX9 1081 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 DACT3Q96B18 629 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 CRELD1Q96HD1 420 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 MAP6Q96JE9 813 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF512BQ96KM6 892 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 PHACTR3Q96KR7 559 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 SIGLEC10Q96LC7 697 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 PLCD4Q9BRC7 762 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 CGNQ9P2M7 1197 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 POLKQ9UBT6 870 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 PALD1Q9ULE6 856 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 AOX1Q06278 1338 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 ROBO2Q9HCK4 1378 aa4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 SETD1AO15047 1707 aaKnown RBP4.89□□□□□ -1.63
HMGB3P22-202ENST00000451823 MEIS1O00470 390 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 N4BP3O15049 544 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 GREM1O60565 184 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 SASH1O94885 1247 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 CHMLP26374 656 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 YBX1P67809 324 aaKnown RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 RNF4P78317 190 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 DNTTIP2Q5QJE6 756 aaKnown RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 PLA2G4DQ86XP0 818 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZDHHC14Q8IZN3 488 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF296Q8WUU4 475 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ATG4CQ96DT6 458 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 EPB41L4AQ9HCS5 686 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 BCCIPQ9P287 314 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 PAXBP1Q9Y5B6 917 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 PTPRCP08575 1304 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 CCDC171Q6TFL3 1326 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ITSN1Q15811 1721 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ARHGEF10O15013 1369 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 CHD2O14647 1828 aaKnown RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 MAP2P11137 1827 aaKnown RBP4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 ADGRL3Q9HAR2 1447 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 MLH3Q9UHC1 1453 aa4.88□□□□□ -1.63
HMGB3P22-202ENST00000451823 RGPD1P0DJD0 1748 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 XRN1Q8IZH2 1706 aaKnown RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 OTOL1A6NHN0 477 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 WTIPA6NIX2 430 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 FADS2P1A8MWK0 482 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 CHL1O00533 1208 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 ATE1O95260 518 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 PRAMEF1O95521 474 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 MPOP05164 745 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 AFF3P51826 1226 aaKnown RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 RBM6P78332 1123 aaKnown RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 CLCQ05315 142 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 LMOD3Q0VAK6 560 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 CDCP2Q5VXM1 449 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 GK5Q6ZS86 529 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 TDRD7Q8NHU6 1098 aaKnown RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 KIF1BPQ96EK5 621 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 THUMPD2Q9BTF0 503 aaKnown RBP4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 XYLT2Q9H1B5 865 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 TERF2IPQ9NYB0 399 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 GMIPQ9P107 970 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 KLHL14Q9P2G3 628 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 TNFRSF10DQ9UBN6 386 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 FBXL21Q9UKT6 434 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 CNPY2Q9Y2B0 182 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 ELP1O95163 1332 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 MSH6P52701 1360 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 CRB1P82279 1406 aa4.87□□□□□ -1.63
HMGB3P22-202ENST00000451823 GOLGA6L6A8MZA4 724 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 STX6O43752 255 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 PRKCAP17252 672 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CAPN2P17655 700 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 SYT1P21579 422 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 MCCP23508 829 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 ZNF75DP51815 510 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CDR1P51861 262 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CYP4F8P98187 520 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 RAD51AP2Q09MP3 1159 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 CHAF1AQ13111 956 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 NFIXQ14938 502 aa4.86□□□□□ -1.63
HMGB3P22-202ENST00000451823 KRT24Q2M2I5 525 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms