RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 CCDC155Q8N6L0 562 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 KHSRPQ92945 711 aaKnown RBP eCLIP11.81□□□□□ -0.522e-6■■■□□ 15.9
LINC01004-202ENST00000450686 SPATA33Q96N06 139 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 IWS1Q96ST2 819 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 PDCD2LQ9BRP1 358 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 EPHX3Q9H6B9 360 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 PCDHA1Q9Y5I3 950 aa11.81□□□□□ -0.52
LINC01004-202ENST00000450686 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 HAS3O00219 553 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 EIF3JO75822 258 aaKnown RBP11.8□□□□□ -0.52
LINC01004-202ENST00000450686 BAIAP3O94812 1187 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 F2P00734 622 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 CTSHP09668 335 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 PGM5Q15124 567 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 MYSM1Q5VVJ2 828 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 PPTC7Q8NI37 304 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 AMNQ9BXJ7 453 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 KRT23Q9C075 422 aa11.8□□□□□ -0.52
LINC01004-202ENST00000450686 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
LINC01004-202ENST00000450686 LINC01553A4QN01 128 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 ZBTB5O15062 677 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 CYTH3O43739 400 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 GJB5O95377 273 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 CXCL10P02778 98 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 THPOP40225 353 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 SP4Q02446 784 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 COL9A3Q14050 684 aaPredicted RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 CELF3Q5SZQ8 465 aaKnown RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 STOX1Q6ZVD7 989 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 EMID1Q96A84 441 aaPredicted RBP11.79□□□□□ -0.52
LINC01004-202ENST00000450686 MTMR8Q96EF0 704 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 C16orf70Q9BSU1 422 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 RTEL1Q9NZ71 1219 aa11.79□□□□□ -0.52
LINC01004-202ENST00000450686 TRIOO75962 3097 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 FAM86C2PA6NEL3 165 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 CYP21A2P08686 494 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 RBL2Q08999 1139 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 SEMA3FQ13275 785 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 PTK7Q13308 1070 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 GRM4Q14833 912 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 VSIG10LQ86VR7 867 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 MYOCDQ8IZQ8 938 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 DBF4BQ8NFT6 615 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 HLA-CQ95604 372 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 CD320Q9NPF0 282 aa11.78□□□□□ -0.52
LINC01004-202ENST00000450686 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
LINC01004-202ENST00000450686 HIP1O00291 1037 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
LINC01004-202ENST00000450686 TREHO43280 583 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 LGR5O75473 907 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 UPP2O95045 317 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 LGALS2P05162 132 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
LINC01004-202ENST00000450686 CCND2P30279 289 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 ANTXR2P58335 489 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
LINC01004-202ENST00000450686 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 RAD9AQ99638 391 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 KATNAL1Q9BW62 490 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 MLXIPQ9HAP2 919 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
LINC01004-202ENST00000450686 ABHD14A-ACY1A0A1B0GW23 586 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 RSPH10B2B2RC85 870 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 CSPG5O95196 566 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 RSPH10BP0C881 870 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 GHRHRQ02643 423 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 IKBKEQ14164 716 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 AAK1Q2M2I8 961 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 TTC22Q5TAA0 569 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
LINC01004-202ENST00000450686 CYFIP1Q7L576 1253 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 SERINC5Q86VE9 423 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
LINC01004-202ENST00000450686 ATP6V0A1Q93050 837 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
LINC01004-202ENST00000450686 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms