RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 EVCP57679 992 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 AP3B2Q13367 1082 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 CYFIP1Q7L576 1253 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
SGCE-208ENST00000450385 VWCEQ96DN2 955 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 JAKMIP1Q96N16 626 aaKnown RBP18.37■□□□□ 0.53
SGCE-208ENST00000450385 CTAGE1Q96RT6 745 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 SLC9A7Q96T83 725 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 GPR20Q99678 358 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 PBX4Q9BYU1 374 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 PCDHA6Q9UN73 950 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 PCDHA8Q9Y5H6 950 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 PCDHA11Q9Y5I1 949 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 UBIAD1Q9Y5Z9 338 aa18.37■□□□□ 0.53
SGCE-208ENST00000450385 CXCL10P02778 98 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 LGALS2P05162 132 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 CKBP12277 381 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 RPS6KB1P23443 525 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 NAPAP54920 295 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 CHMP4BP1P59074 171 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 SEMA3FQ13275 785 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 Q6ZUG5 572 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 EMSYQ7Z589 1322 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 ALG1Q9BT22 464 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 JADE2Q9NQC1 790 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 FAM217BQ9NTX9 383 aaPredicted RBP18.36■□□□□ 0.53
SGCE-208ENST00000450385 PPP4R2Q9NY27 417 aa18.36■□□□□ 0.53
SGCE-208ENST00000450385 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
SGCE-208ENST00000450385 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 UNC80Q8N2C7 3258 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
SGCE-208ENST00000450385 ATP2A2P16615 1042 aaKnown RBP18.35■□□□□ 0.53
SGCE-208ENST00000450385 ADCY7P51828 1080 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 MTMR1Q13613 665 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 PFKFB3Q16875 520 aaPredicted RBP18.35■□□□□ 0.53
SGCE-208ENST00000450385 WWC2Q6AWC2 1192 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 LRRC8DQ7L1W4 858 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 NIPA1Q7RTP0 329 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 SEPT1Q8WYJ6 367 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
SGCE-208ENST00000450385 FAM161BQ96MY7 647 aa18.35■□□□□ 0.53
SGCE-208ENST00000450385 FTOQ9C0B1 505 aaKnown RBP eCLIP18.35■□□□□ 0.53
SGCE-208ENST00000450385 C17orf102A2RUQ5 167 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 SMCO2A6NFE2 343 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 STXBP3O00186 592 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 ITGB5P18084 799 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 DEFB128Q7Z7B8 93 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 FAM177A1Q8N128 213 aaPredicted RBP18.34■□□□□ 0.53
SGCE-208ENST00000450385 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 SLC28A3Q9HAS3 691 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 EYSQ5T1H1 3165 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 DOCK5Q9H7D0 1870 aa18.34■□□□□ 0.53
SGCE-208ENST00000450385 GBF1Q92538 1859 aa18.33■□□□□ 0.53
SGCE-208ENST00000450385 NFASCO94856 1347 aa18.33■□□□□ 0.53
SGCE-208ENST00000450385 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
SGCE-208ENST00000450385 ABHD14A-ACY1A0A1B0GW23 586 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 ZBBXA8MT70 800 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 PRPF3O43395 683 aaKnown RBP18.33■□□□□ 0.52
SGCE-208ENST00000450385 SCG2P13521 617 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 KCNA2P16389 499 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 GNA11P29992 359 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 CDC27P30260 824 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 CLK2P49760 499 aaKnown RBP18.33■□□□□ 0.52
SGCE-208ENST00000450385 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
SGCE-208ENST00000450385 CNKSR3Q6P9H4 555 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 FAM43BQ6ZT52 329 aaPredicted RBP18.33■□□□□ 0.52
SGCE-208ENST00000450385 RUFY3Q7L099 469 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.52
SGCE-208ENST00000450385 BRF1Q92994 677 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 ATP6V0A1Q93050 837 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 MXRA8Q9BRK3 442 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 ZSWIM6Q9HCJ5 1215 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 CHD9Q3L8U1 2897 aa18.33■□□□□ 0.52
SGCE-208ENST00000450385 PRUNE2Q8WUY3 3088 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 hCG_1642624A0A1W2PR95 340 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 SMIM10L2AP0DMW4 78 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 SMIM10L2BP0DMW5 78 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 FOSL2P15408 326 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 ADD1P35611 737 aaKnown RBP18.32■□□□□ 0.52
SGCE-208ENST00000450385 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 UBE2SQ16763 222 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 TRIM71Q2Q1W2 868 aaKnown RBP18.32■□□□□ 0.52
SGCE-208ENST00000450385 CEP55Q53EZ4 464 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 RPAINQ86UA6 219 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 GAS2L1Q99501 681 aaPredicted RBP18.32■□□□□ 0.52
SGCE-208ENST00000450385 RNF26Q9BY78 433 aaPredicted RBP18.32■□□□□ 0.52
SGCE-208ENST00000450385 RNPEPQ9H4A4 650 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 SMARCAD1Q9H4L7 1026 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 ERAP1Q9NZ08 941 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 CYP46A1Q9Y6A2 500 aa18.32■□□□□ 0.52
SGCE-208ENST00000450385 IFNAR1P17181 557 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms