RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 AFG1LQ8WV93 481 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 BRPF3Q9ULD4 1205 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
FAM3A-216ENST00000449971 TANC1Q9C0D5 1861 aa20.2■□□□□ 0.82
FAM3A-216ENST00000449971 MUC6Q6W4X9 2439 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 hCG_1642624A0A1W2PR95 340 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 A6NJR5 290 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 ZBTB43O43298 467 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 GPR37L1O60883 481 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 SSTR3P32745 418 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-216ENST00000449971 PTPN11Q06124 597 aaPredicted RBP20.19■□□□□ 0.82
FAM3A-216ENST00000449971 LRRC8DQ7L1W4 858 aa20.19■□□□□ 0.82
FAM3A-216ENST00000449971 KLF18A0A0U1RQI7 1052 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 GH1P01241 217 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 KCNA5P22460 613 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 PGM5Q15124 567 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 ALYREFQ86V81 257 aaKnown RBP20.18■□□□□ 0.82
FAM3A-216ENST00000449971 VSIG10LQ86VR7 867 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 CAGE1Q8TC20 777 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 AFAP1L1Q8TED9 768 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 CUL5Q93034 780 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 ZFP91Q96JP5 570 aaPredicted RBP20.18■□□□□ 0.82
FAM3A-216ENST00000449971 UBE2ZQ9H832 354 aaPredicted RBP20.18■□□□□ 0.82
FAM3A-216ENST00000449971 SUGCTQ9HAC7 445 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 RBM28Q9NW13 759 aaKnown RBP20.18■□□□□ 0.82
FAM3A-216ENST00000449971 MRVI1Q9Y6F6 885 aa20.18■□□□□ 0.82
FAM3A-216ENST00000449971 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
FAM3A-216ENST00000449971 SELPP16109 830 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 CCND2P30279 289 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 RTN1Q16799 776 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 TCTN1Q2MV58 587 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 Q6ZUG5 572 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 IL31RAQ8NI17 732 aa20.17■□□□□ 0.82
FAM3A-216ENST00000449971 DHX38Q92620 1227 aaKnown RBP20.17■□□□□ 0.82
FAM3A-216ENST00000449971 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
FAM3A-216ENST00000449971 DDX41Q9UJV9 622 aaKnown RBP20.17■□□□□ 0.82
FAM3A-216ENST00000449971 ARIH1Q9Y4X5 557 aaPredicted RBP20.17■□□□□ 0.82
FAM3A-216ENST00000449971 MYH6P13533 1939 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 PTPRSQ13332 1948 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 GOLGA8AA7E2F4 631 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 PI4K2BG5E9Z4 385 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 MMP3P08254 477 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 PSMA5P28066 241 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 GPNMBQ14956 572 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 CNKSR3Q6P9H4 555 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 USP17L6PQ6QN14 398 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 GJD3Q8N144 294 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 RAD9AQ99638 391 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 ALG1Q9BT22 464 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 PSTPIP2Q9H939 334 aa20.16■□□□□ 0.82
FAM3A-216ENST00000449971 NBNO60934 754 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 RGS20O76081 388 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 APOBRQ0VD83 1088 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 HEATR3Q7Z4Q2 680 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 BRF1Q92994 677 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 CTAGE1Q96RT6 745 aa20.15■□□□□ 0.82
FAM3A-216ENST00000449971 LINC01553A4QN01 128 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 MEIS2O14770 477 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 GJB5O95377 273 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 CKBP12277 381 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 IL9P15248 144 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
FAM3A-216ENST00000449971 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 ERVK-21P61565 698 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 KCNV1Q6PIU1 500 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 DHX37Q8IY37 1157 aaKnown RBP20.14■□□□□ 0.81
FAM3A-216ENST00000449971 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
FAM3A-216ENST00000449971 LMCD1Q9NZU5 365 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 HDAC6Q9UBN7 1215 aa20.14■□□□□ 0.81
FAM3A-216ENST00000449971 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
FAM3A-216ENST00000449971 PIK3CDO00329 1044 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
FAM3A-216ENST00000449971 SORBS3O60504 671 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 LAMC2Q13753 1193 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 C7orf31Q8N865 590 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.13■□□□□ 0.81
FAM3A-216ENST00000449971 KAT2BQ92831 832 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 C17orf80Q9BSJ5 609 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 RTEL1Q9NZ71 1219 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 PIEZO1Q92508 2521 aa20.13■□□□□ 0.81
FAM3A-216ENST00000449971 CNTNAP5Q8WYK1 1306 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 ABHD14A-ACY1A0A1B0GW23 586 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 ZNF286BP0CG31 522 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 CDC27P30260 824 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 METAP2P50579 478 aaKnown RBP eCLIP20.12■□□□□ 0.81
FAM3A-216ENST00000449971 IKBKEQ14164 716 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 CSPP1Q1MSJ5 1256 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 PTCRAQ6ISU1 281 aaPredicted RBP20.12■□□□□ 0.81
FAM3A-216ENST00000449971 FAM178BQ8IXR5 827 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 FBXO22Q8NEZ5 403 aa20.12■□□□□ 0.81
FAM3A-216ENST00000449971 FAM217BQ9NTX9 383 aaPredicted RBP20.12■□□□□ 0.81
FAM3A-216ENST00000449971 H3BQ06 376 aaPredicted RBP20.11■□□□□ 0.81
FAM3A-216ENST00000449971 TGFB3P10600 412 aa20.11■□□□□ 0.81
FAM3A-216ENST00000449971 ADD1P35611 737 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms