RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ERO1AQ96HE7 468 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 AK8Q96MA6 479 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 RIT2Q99578 217 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 TCEAL9Q9UHQ7 104 aa16.48■□□□□ 0.23
TNF-208ENST00000449264 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
TNF-208ENST00000449264 SNAI1O95863 264 aaPredicted RBP16.47■□□□□ 0.23
TNF-208ENST00000449264 UBA1P22314 1058 aaKnown RBP16.47■□□□□ 0.23
TNF-208ENST00000449264 ICAM3P32942 547 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 UBA7P41226 1012 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 SPIRE1Q08AE8 756 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 PDILTQ8N807 584 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 UNC45AQ9H3U1 944 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 VTA1Q9NP79 307 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 TBC1D22BQ9NU19 505 aa16.47■□□□□ 0.23
TNF-208ENST00000449264 DHX15O43143 795 aaKnown RBP16.46■□□□□ 0.23
TNF-208ENST00000449264 TRAK2O60296 914 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 NR1I2O75469 434 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 ARIH2O95376 493 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 CYP2C19P33261 490 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 SP2Q02086 613 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 SP4Q02446 784 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 FAM160A1Q05DH4 1040 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 PDIA5Q14554 519 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 CABP7Q86V35 215 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 MSL3Q8N5Y2 521 aaKnown RBP16.46■□□□□ 0.23
TNF-208ENST00000449264 SNX29Q8TEQ0 813 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 PANK2Q9BZ23 570 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 WBP1LQ9NX94 342 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 KCNH3Q9ULD8 1083 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 CENPFP49454 3210 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 HOXD10P28358 340 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 SYKP43405 635 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 PPP2R5CQ13362 524 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
TNF-208ENST00000449264 LY6KQ17RY6 165 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 OLFML2BQ68BL8 750 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 KATNBL1Q9H079 304 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 ABHD16BQ9H3Z7 469 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 BCAS3Q9H6U6 928 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
TNF-208ENST00000449264 DACT1Q9NYF0 836 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 SRRDQ9UH36 339 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
TNF-208ENST00000449264 NFASCO94856 1347 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 WDR81Q562E7 1941 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 EML1O00423 815 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
TNF-208ENST00000449264 ACVR2BQ13705 512 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 TTLL4Q14679 1199 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
TNF-208ENST00000449264 PRAMEF19Q5SWL8 479 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 TRIB2Q92519 343 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 PLIN2Q99541 437 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 SAMM50Q9Y512 469 aa16.45■□□□□ 0.22
TNF-208ENST00000449264 A0A087X0B3 334 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 POLR2DO15514 142 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 GGPS1O95749 300 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 TXNP10599 105 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 CCT6AP40227 531 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 KRT76Q01546 638 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 CYP4A11Q02928 519 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 HAUS3Q68CZ6 603 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 TAPT1Q6NXT6 567 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 CAVIN1Q6NZI2 390 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 MIER3Q7Z3K6 550 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 DHX58Q96C10 678 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 CDK5RAP3Q96JB5 506 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 MMTAG2Q9BU76 263 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
TNF-208ENST00000449264 HTTP42858 3142 aa16.44■□□□□ 0.22
TNF-208ENST00000449264 FAM237AA0A1B0GTK4 181 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 CCNE2O96020 404 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 TGFB3P10600 412 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 SNW1Q13573 536 aaKnown RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 NEDD9Q14511 834 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 TMEM63BQ5T3F8 832 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 FMR1NBQ8N0W7 255 aaPredicted RBP16.43■□□□□ 0.22
TNF-208ENST00000449264 ENGASEQ8NFI3 743 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 COPS5Q92905 334 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 CALML4Q96GE6 196 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 SENP7Q9BQF6 1050 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 CCSER1Q9C0I3 900 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
TNF-208ENST00000449264 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms