RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 KCNA2P16389 499 aa28.52■■■□□ 2.16
UFD1-204ENST00000447868 PSEN2P49810 448 aa28.52■■■□□ 2.16
UFD1-204ENST00000447868 MFSD10Q14728 455 aa28.52■■■□□ 2.16
UFD1-204ENST00000447868 MCTP2Q6DN12 878 aa28.52■■■□□ 2.16
UFD1-204ENST00000447868 GIMAP8Q8ND71 665 aaPredicted RBP28.52■■■□□ 2.16
UFD1-204ENST00000447868 A0A1W2PPC1 479 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 CTDNEP1O95476 244 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 TDHQ8IZJ6 230 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 GTF3C6Q969F1 213 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 KIF2CQ99661 725 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 GPR20Q99678 358 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 KATNAL1Q9BW62 490 aa28.51■■■□□ 2.15
UFD1-204ENST00000447868 F2P00734 622 aa28.5■■■□□ 2.15
UFD1-204ENST00000447868 PTPN11Q06124 597 aaPredicted RBP28.5■■■□□ 2.15
UFD1-204ENST00000447868 KIAA0753Q2KHM9 967 aa28.5■■■□□ 2.15
UFD1-204ENST00000447868 CEP55Q53EZ4 464 aa28.5■■■□□ 2.15
UFD1-204ENST00000447868 HIPK3Q9H422 1215 aa28.5■■■□□ 2.15
UFD1-204ENST00000447868 KCNH7Q9NS40 1196 aa28.5■■■□□ 2.15
UFD1-204ENST00000447868 STK36Q9NRP7 1315 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 MAFGO15525 162 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 LGALS2P05162 132 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 SUPT20HL2P0C7V6 817 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 ARP10275 920 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 CYP2C9P11712 490 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 CYP2C18P33260 490 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 FPGSQ05932 587 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 PCDHA4Q9UN74 947 aa28.49■■■□□ 2.15
UFD1-204ENST00000447868 RBM25P49756 843 aaKnown RBP28.48■■■□□ 2.15
UFD1-204ENST00000447868 UTP14CQ5TAP6 766 aaKnown RBP28.48■■■□□ 2.15
UFD1-204ENST00000447868 C7orf31Q8N865 590 aa28.48■■■□□ 2.15
UFD1-204ENST00000447868 C16orf70Q9BSU1 422 aa28.48■■■□□ 2.15
UFD1-204ENST00000447868 NOC4LQ9BVI4 516 aaKnown RBP28.48■■■□□ 2.15
UFD1-204ENST00000447868 UPF2Q9HAU5 1272 aaKnown RBP28.48■■■□□ 2.15
UFD1-204ENST00000447868 ORC3Q9UBD5 711 aaPredicted RBP28.48■■■□□ 2.15
UFD1-204ENST00000447868 NOD1Q9Y239 953 aa28.48■■■□□ 2.15
UFD1-204ENST00000447868 GTF3C3Q9Y5Q9 886 aa28.48■■■□□ 2.15
UFD1-204ENST00000447868 UMODL1Q5DID0 1318 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 HAS3O00219 553 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 PTGISQ16647 500 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 GDF6Q6KF10 455 aaPredicted RBP28.47■■■□□ 2.15
UFD1-204ENST00000447868 MFSD5Q6N075 450 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 CRYGNQ8WXF5 182 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 HDAC6Q9UBN7 1215 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 KCNJ14Q9UNX9 436 aa28.47■■■□□ 2.15
UFD1-204ENST00000447868 FAM86B1E9PN63 330 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 MEIS1O00470 390 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 CYP3A4P08684 503 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 FAM86B2P0C5J1 330 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 FXR1P51114 621 aaKnown RBP eCLIP28.46■■■□□ 2.15
UFD1-204ENST00000447868 EPHB4P54760 987 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 SESTD1Q86VW0 696 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 PLA2G4DQ86XP0 818 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 BLIDQ8IZY5 108 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 AGO4Q9HCK5 861 aaKnown RBP28.46■■■□□ 2.15
UFD1-204ENST00000447868 LIMCH1Q9UPQ0 1083 aa28.46■■■□□ 2.15
UFD1-204ENST00000447868 H3BRB1 525 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 CCL23P55773 120 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 C9orf50Q5SZB4 431 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 TRIM50Q86XT4 487 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 TMEM199Q8N511 208 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 UIMC1Q96RL1 719 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 SDF4Q9BRK5 362 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 TUT1Q9H6E5 874 aaKnown RBP28.45■■■□□ 2.14
UFD1-204ENST00000447868 JPH1Q9HDC5 661 aaPredicted RBP28.45■■■□□ 2.14
UFD1-204ENST00000447868 GTF2IRD1Q9UHL9 959 aa28.45■■■□□ 2.14
UFD1-204ENST00000447868 CSF2RAP15509 400 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 XBP1P17861 261 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 TCF7P36402 384 aaPredicted RBP28.44■■■□□ 2.14
UFD1-204ENST00000447868 SHHQ15465 462 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 NIPA1Q7RTP0 329 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 DAGLBQ8NCG7 672 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 NSUN7Q8NE18 718 aaKnown RBP28.44■■■□□ 2.14
UFD1-204ENST00000447868 WASF1Q92558 559 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 GJB4Q9NTQ9 266 aa28.44■■■□□ 2.14
UFD1-204ENST00000447868 FDPSP14324 419 aaKnown RBP28.43■■■□□ 2.14
UFD1-204ENST00000447868 ST3GAL1Q11201 340 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 ITGB3BPQ13352 177 aaPredicted RBP28.43■■■□□ 2.14
UFD1-204ENST00000447868 NPY5RQ15761 445 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 GALNT17Q6IS24 598 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 FAM177A1Q8N128 213 aaPredicted RBP28.43■■■□□ 2.14
UFD1-204ENST00000447868 SEPT1Q8WYJ6 367 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 PHF20Q9BVI0 1012 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 SLC9A2Q9UBY0 812 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 NFASCO94856 1347 aa28.43■■■□□ 2.14
UFD1-204ENST00000447868 IGLV3-22A0A075B6J6 115 aa28.42■■■□□ 2.14
UFD1-204ENST00000447868 GSTTP1A0A1W2PQM5 241 aa28.42■■■□□ 2.14
UFD1-204ENST00000447868 JAK2O60674 1132 aa28.42■■■□□ 2.14
UFD1-204ENST00000447868 PPIGQ13427 754 aaKnown RBP eCLIP28.42■■■□□ 2.141e-6■■■□□ 18
UFD1-204ENST00000447868 PRR16Q569H4 304 aa28.42■■■□□ 2.14
UFD1-204ENST00000447868 WNT8AQ9H1J5 351 aa28.42■■■□□ 2.14
UFD1-204ENST00000447868 ZNF215Q9UL58 517 aaPredicted RBP28.42■■■□□ 2.14
UFD1-204ENST00000447868 M0R2N6 131 aa28.41■■■□□ 2.14
UFD1-204ENST00000447868 DDX39AO00148 427 aaKnown RBP28.41■■■□□ 2.14
UFD1-204ENST00000447868 SOX1O00570 391 aaPredicted RBP28.41■■■□□ 2.14
UFD1-204ENST00000447868 ZNF200P98182 395 aaPredicted RBP28.41■■■□□ 2.14
UFD1-204ENST00000447868 CCDC83Q8IWF9 413 aa28.41■■■□□ 2.14
UFD1-204ENST00000447868 TBCKQ8TEA7 893 aa28.41■■■□□ 2.14
UFD1-204ENST00000447868 SCLYQ96I15 445 aa28.41■■■□□ 2.14
UFD1-204ENST00000447868 CTAGE1Q96RT6 745 aa28.41■■■□□ 2.14
UFD1-204ENST00000447868 SMIM10L2AP0DMW4 78 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms