RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 PITPNM1O00562 1244 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 NOP56O00567 594 aaKnown RBP27.47■■□□□ 1.99
MRPL28-205ENST00000447696 SORBS3O60504 671 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 AP3B2Q13367 1082 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 KIAA0753Q2KHM9 967 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 C7orf31Q8N865 590 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 CCDC12Q8WUD4 166 aaPredicted RBP27.47■■□□□ 1.99
MRPL28-205ENST00000447696 PPP1R13LQ8WUF5 828 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 GTF2IRD1Q9UHL9 959 aa27.47■■□□□ 1.99
MRPL28-205ENST00000447696 MAFGO15525 162 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 IFNAR1P17181 557 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 ITGB5P18084 799 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 CCL23P55773 120 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 ANAPC15P60006 121 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 BFSP2Q13515 415 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 NTRK3Q16288 839 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 PTGISQ16647 500 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 RASIP1Q5U651 963 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 CYFIP1Q7L576 1253 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 C16orf70Q9BSU1 422 aa27.46■■□□□ 1.99
MRPL28-205ENST00000447696 RNF26Q9BY78 433 aaPredicted RBP27.46■■□□□ 1.99
MRPL28-205ENST00000447696 UPF3BQ9BZI7 483 aaKnown RBP27.46■■□□□ 1.99
MRPL28-205ENST00000447696 CLK2P49760 499 aaKnown RBP27.45■■□□□ 1.98
MRPL28-205ENST00000447696 AKAP17AQ02040 695 aaKnown RBP27.45■■□□□ 1.98
MRPL28-205ENST00000447696 PKN1Q16512 942 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 GDF6Q6KF10 455 aaPredicted RBP27.45■■□□□ 1.98
MRPL28-205ENST00000447696 RPUSD2Q8IZ73 545 aaKnown RBP27.45■■□□□ 1.98
MRPL28-205ENST00000447696 CCDC155Q8N6L0 562 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 ZNF274Q96GC6 653 aaPredicted RBP27.45■■□□□ 1.98
MRPL28-205ENST00000447696 GPR20Q99678 358 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 ANO3Q9BYT9 981 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 BCAS3Q9H6U6 928 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 JADE2Q9NQC1 790 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 HDAC6Q9UBN7 1215 aa27.45■■□□□ 1.98
MRPL28-205ENST00000447696 PFKMP08237 780 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 ACRP10323 421 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 RFC2P35250 354 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 MTMR1Q13613 665 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 MCTP2Q6DN12 878 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 ZNF365Q70YC5 407 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 CAGE1Q8TC20 777 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 CTAGE1Q96RT6 745 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 ALG1Q9BT22 464 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 ZMYND12Q9H0C1 365 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 PDRG1Q9NUG6 133 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 CDH23Q9H251 3354 aa27.44■■□□□ 1.98
MRPL28-205ENST00000447696 TNFRSF10AO00220 468 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 LGALS2P05162 132 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 KCNA2P16389 499 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 SREBF1P36956 1147 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 RETREG2Q8NC44 543 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 HERVK_113Q902F9 699 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 PHKBQ93100 1093 aa27.43■■□□□ 1.98
MRPL28-205ENST00000447696 MTIF3Q9H2K0 278 aaKnown RBP27.43■■□□□ 1.98
MRPL28-205ENST00000447696 H3BRB1 525 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 FGBP02675 491 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 DNAJB2P25686 324 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 CCT2P78371 535 aaKnown RBP27.42■■□□□ 1.98
MRPL28-205ENST00000447696 RBL2Q08999 1139 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 SCLYQ96I15 445 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 TUT1Q9H6E5 874 aaKnown RBP27.42■■□□□ 1.98
MRPL28-205ENST00000447696 NCOA5Q9HCD5 579 aaKnown RBP27.42■■□□□ 1.98
MRPL28-205ENST00000447696 C6orf50Q9HD87 102 aa27.42■■□□□ 1.98
MRPL28-205ENST00000447696 GRIN2CQ14957 1233 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 CCDC148Q8NFR7 591 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 AFAP1L1Q8TED9 768 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 IL17RAQ96F46 866 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 MXRA8Q9BRK3 442 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 SLC26A6Q9BXS9 759 aa27.41■■□□□ 1.98
MRPL28-205ENST00000447696 ATP9AO75110 1047 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 GNA11P29992 359 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 PTK7Q13308 1070 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 TRIM22Q8IYM9 498 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 PGBD1Q96JS3 809 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 ZNF576Q9H609 170 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 TMEM260Q9NX78 707 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 ZNF215Q9UL58 517 aaPredicted RBP27.4■■□□□ 1.98
MRPL28-205ENST00000447696 TANC1Q9C0D5 1861 aa27.4■■□□□ 1.98
MRPL28-205ENST00000447696 IQCF3P0C7M6 154 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 HOXC8P31273 242 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 CEP55Q53EZ4 464 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 REXO1Q8N1G1 1221 aaKnown RBP27.39■■□□□ 1.98
MRPL28-205ENST00000447696 DHX38Q92620 1227 aaKnown RBP27.39■■□□□ 1.98
MRPL28-205ENST00000447696 VWCEQ96DN2 955 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 SH3GLB2Q9NR46 395 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 KCNH7Q9NS40 1196 aa27.39■■□□□ 1.98
MRPL28-205ENST00000447696 CPLX1O14810 134 aa27.38■■□□□ 1.97
MRPL28-205ENST00000447696 ARHGAP4P98171 946 aa27.38■■□□□ 1.97
MRPL28-205ENST00000447696 CPLX2Q6PUV4 134 aaKnown RBP27.38■■□□□ 1.97
MRPL28-205ENST00000447696 NIPA1Q7RTP0 329 aa27.38■■□□□ 1.97
MRPL28-205ENST00000447696 BICD2Q8TD16 824 aa27.38■■□□□ 1.97
MRPL28-205ENST00000447696 ATXN2LQ8WWM7 1075 aaKnown RBP27.38■■□□□ 1.97
MRPL28-205ENST00000447696 TIFAQ96CG3 184 aa27.38■■□□□ 1.97
MRPL28-205ENST00000447696 PARNO95453 639 aaKnown RBP27.37■■□□□ 1.97
MRPL28-205ENST00000447696 SP4Q02446 784 aa27.37■■□□□ 1.97
MRPL28-205ENST00000447696 JAKMIP3Q5VZ66 844 aa27.37■■□□□ 1.97
MRPL28-205ENST00000447696 CRYGNQ8WXF5 182 aa27.37■■□□□ 1.97
MRPL28-205ENST00000447696 SEPT1Q8WYJ6 367 aa27.37■■□□□ 1.97
MRPL28-205ENST00000447696 GAS2L1Q99501 681 aaPredicted RBP27.37■■□□□ 1.97
MRPL28-205ENST00000447696 NFASCO94856 1347 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms