RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 CENPUQ71F23 418 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NUP93Q8N1F7 819 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 MAGEF1Q9HAY2 307 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 RTEL1Q9NZ71 1219 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 EPN1Q9Y6I3 576 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 UGGT2Q9NYU1 1516 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 POGZQ7Z3K3 1410 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8MH3BSY2 632 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PSMA7O14818 248 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TSC22D2O75157 780 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 IBSPP21815 317 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 IL32P24001 234 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 CHMLP26374 656 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GSTT1P30711 240 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZC3H6P61129 1189 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 KRT81Q14533 505 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 C8orf76Q96K31 380 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PRPF18Q99633 342 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 C19orf44Q9H6X5 657 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZSWIM4Q9H7M6 989 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 RABL2BQ9UNT1 228 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZNF711Q9Y462 761 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 NFE2L3Q9Y4A8 694 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 USP15Q9Y4E8 981 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 WDR17Q8IZU2 1322 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 TRAPPC3O43617 180 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZBED1O96006 694 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 C4BPBP20851 252 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 GUCY2FP51841 1108 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 POLGP54098 1239 aaPredicted RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 DNAL1Q4LDG9 190 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 ZC3H18Q86VM9 953 aaKnown RBP3.16□□□□□ -1.9
CHD9-203ENST00000447540 CD248Q9HCU0 757 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 LZTFL1Q9NQ48 299 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 UVRAGQ9P2Y5 699 aa3.16□□□□□ -1.9
CHD9-203ENST00000447540 PRR23AA6NEV1 266 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ECEL1O95672 775 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 KRT7P08729 469 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 IDEP14735 1019 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 MSH2P43246 934 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 RPL5P46777 297 aaKnown RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 CD97P48960 835 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 DAB2P98082 770 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CDK17Q00537 523 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CCDC15Q0P6D6 951 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CNGA2Q16280 664 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.15□□□□□ -1.9
CHD9-203ENST00000447540 PACS1Q6VY07 963 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ALLCQ8N6M5 410 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 JADE3Q92613 823 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 BORCS5Q969J3 196 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 VTI1AQ96AJ9 217 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 DHX58Q96C10 678 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 LRRC37BQ96QE4 947 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ASCC2Q9H1I8 757 aaPredicted RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 PPANQ9NQ55 473 aaKnown RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 UNC13BO14795 1591 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 MAGEB16A2A368 324 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 F8W8V4 182 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8RI6L899 631 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CCDC22O60826 627 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 DTNBO60941 627 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 SLC4A2P04920 1241 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 S100A6P06703 90 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 RILPL1Q5EBL4 403 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 SMYD5Q6GMV2 418 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 HORMAD1Q86X24 394 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 RIBC1Q8N443 379 aaPredicted RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 LPIN2Q92539 896 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ABTB1Q969K4 478 aaPredicted RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 XAGE2Q96GT9 111 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 GPR101Q96P66 508 aaPredicted RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 HAPLN3Q96S86 360 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 EFHD1Q9BUP0 239 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ADGRA3Q8IWK6 1321 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 H7C1D1 291 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CES2O00748 559 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 AGTP01019 485 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 HDGFP51858 240 aaKnown RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 COPS2P61201 443 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 CAV1Q03135 178 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 SPCS2Q15005 226 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 PSMD6Q15008 389 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 C15orf59Q2T9L4 293 aaPredicted RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 ATXN2LQ8WWM7 1075 aaKnown RBP3.15□□□□□ -1.9
CHD9-203ENST00000447540 SAR1AQ9NR31 198 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ARMC1Q9NVT9 282 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 ZNF212Q9UDV6 495 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 RFX7Q2KHR2 1363 aa3.15□□□□□ -1.9
CHD9-203ENST00000447540 NUTM2FA1L443 756 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 ALADP13716 330 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 IARSP41252 1262 aaKnown RBP3.15□□□□□ -1.91
CHD9-203ENST00000447540 VSNL1P62760 191 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 CAMK4Q16566 473 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TEDDM1Q5T9Z0 273 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 TRIM68Q6AZZ1 485 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 SYCE2Q6PIF2 218 aa3.15□□□□□ -1.91
CHD9-203ENST00000447540 HDGFL2Q7Z4V5 671 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms