RNA–Protein interactions for RNA: ENST00000447198.2

AC003988.1-201, humanhuman

TSL 5 BASIC

Gene AC003988.1, Length 578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003988.1-201ENST00000447198 TRIM55Q9BYV6 548 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 AP5M1Q9H0R1 490 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 EPN3Q9H201 632 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 DEF6Q9H4E7 631 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 BTG4Q9NY30 223 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 MARCH2Q9P0N8 246 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 CLEC1BQ9P126 229 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 EMC9Q9Y3B6 208 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 MAPKBP1O60336 1514 aa3.14□□□□□ -1.91
AC003988.1-201ENST00000447198 KIF21BO75037 1637 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 C7orf72A4D263 438 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 U2SURPO15042 1029 aaKnown RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 GPR42O15529 346 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 SGSM2O43147 1006 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 GJB6O95452 261 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 CYP1A1P04798 512 aaPredicted RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 SNRPB2P08579 225 aaKnown RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 PLS3P13797 630 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 PRELPP51888 382 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 C1QTNF8P60827 252 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 SURF1Q15526 300 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 PRR31Q5SQ13 230 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 MBLAC2Q68D91 279 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ANKS3Q6ZW76 656 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 PLEKHH3Q7Z736 793 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ZC3H18Q86VM9 953 aaKnown RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ZNF227Q86WZ6 799 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 CIR1Q86X95 450 aaPredicted RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 CKAP2LQ8IYA6 745 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 BTN2A2Q8WVV5 523 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 HNRNPLLQ8WVV9 542 aaKnown RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ZSWIM3Q96MP5 696 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 CDK5RAP1Q96SZ6 601 aaKnown RBP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 NKX2-4Q9H2Z4 354 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 PCDH18Q9HCL0 1135 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 CD248Q9HCU0 757 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 JADE2Q9NQC1 790 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ATAD2BQ9ULI0 1458 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 ADAMTSL3P82987 1691 aa3.13□□□□□ -1.91
AC003988.1-201ENST00000447198 IFT140Q96RY7 1462 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 MEFVO15553 781 aaPredicted RBP3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 CPP00450 1065 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 ITGAVP06756 1048 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 HOXC12P31275 282 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 ECI1P42126 302 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 SELENOPP49908 381 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 RPL11P62913 178 aaKnown RBP3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 KCNAB2Q13303 367 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 DDR2Q16832 855 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 NAALADL2Q58DX5 795 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 SPDYAQ5MJ70 313 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 IQCEQ6IPM2 695 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 MIB1Q86YT6 1006 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 TEX2Q8IWB9 1127 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 ZNF513Q8N8E2 541 aaPredicted RBP3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 PLEKHO2Q8TD55 490 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 CCDC140Q96MF4 163 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 PTPN18Q99952 460 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 ZNF341Q9BYN7 854 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 TANGO6Q9C0B7 1094 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 CYP26B1Q9NR63 512 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 ST7Q9NRC1 585 aa3.12□□□□□ -1.91
AC003988.1-201ENST00000447198 LRP5O75197 1615 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 YEATS2Q9ULM3 1422 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 STRCQ7RTU9 1775 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 URB2Q14146 1524 aaKnown RBP3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 IQCA1LA6NCM1 817 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 C9orf118A6NHY6 69 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 MUSKO15146 869 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 THBDP07204 575 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 ZNF28P17035 718 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 GTF2A2P52657 109 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 EPHB4P54760 987 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 SMN1Q16637 294 aaKnown RBP3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 SLC10A6Q3KNW5 377 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 E4F1Q66K89 784 aaPredicted RBP3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 ARHGEF18Q6ZSZ5 1173 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 MILR1Q7Z6M3 343 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 FAM126BQ8IXS8 530 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 PPIL6Q8IXY8 311 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 DNERQ8NFT8 737 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 DPF3Q92784 378 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 DIO2Q92813 273 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 COPS5Q92905 334 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 MBD6Q96DN6 1003 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 CHAMP1Q96JM3 812 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 MRGPRX3Q96LB0 322 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 WWC2-AS2Q96NR7 200 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 GMLQ99445 158 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 MMP19Q99542 508 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 YIPF4Q9BSR8 244 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 LGR4Q9BXB1 951 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 TMEM168Q9H0V1 697 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 L2HGDHQ9H9P8 463 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 GPRC5CQ9NQ84 441 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 C11orf21Q9P2W6 132 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 COA3Q9Y2R0 106 aaPredicted RBP3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 TCAF1Q9Y4C2 921 aa3.11□□□□□ -1.91
AC003988.1-201ENST00000447198 TIMM13Q9Y5L4 95 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms