RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CYFIP1Q7L576 1253 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 SPATA33Q96N06 139 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 MBOAT7Q96N66 472 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 MTG1Q9BT17 334 aaPredicted RBP24.98■■□□□ 1.59
APOE-204ENST00000446996 FOXP1Q9H334 677 aaPredicted RBP24.98■■□□□ 1.59
APOE-204ENST00000446996 AGO4Q9HCK5 861 aaKnown RBP24.98■■□□□ 1.59
APOE-204ENST00000446996 SCN10AQ9Y5Y9 1956 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 ALPK3Q96L96 1907 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 DOCK5Q9H7D0 1870 aa24.98■■□□□ 1.59
APOE-204ENST00000446996 INF2Q27J81 1249 aa24.97■■□□□ 1.59
APOE-204ENST00000446996 HSDL1Q3SXM5 330 aa24.97■■□□□ 1.59
APOE-204ENST00000446996 PIK3AP1Q6ZUJ8 805 aa24.97■■□□□ 1.59
APOE-204ENST00000446996 NEK8Q86SG6 692 aa24.97■■□□□ 1.59
APOE-204ENST00000446996 FERMT2Q96AC1 680 aa24.97■■□□□ 1.59
APOE-204ENST00000446996 A0A0U1RQG5 324 aaPredicted RBP24.96■■□□□ 1.59
APOE-204ENST00000446996 GCFC2P16383 781 aaKnown RBP24.96■■□□□ 1.59
APOE-204ENST00000446996 NR5A1Q13285 461 aa24.96■■□□□ 1.59
APOE-204ENST00000446996 PPP4R3AQ6IN85 833 aa24.96■■□□□ 1.59
APOE-204ENST00000446996 CXCL17Q6UXB2 119 aa24.96■■□□□ 1.59
APOE-204ENST00000446996 SLC43A3Q8NBI5 491 aa24.96■■□□□ 1.59
APOE-204ENST00000446996 TBC1D22BQ9NU19 505 aa24.96■■□□□ 1.59
APOE-204ENST00000446996 MYL3P08590 195 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 LRRC26Q2I0M4 334 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 HSCBQ8IWL3 235 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 LENG9Q96B70 501 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 TOX2Q96NM4 488 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 GPR20Q99678 358 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 SDF4Q9BRK5 362 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 BCAS3Q9H6U6 928 aa24.95■■□□□ 1.58
APOE-204ENST00000446996 MROH7Q68CQ1 1323 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 ARVCFO00192 962 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 NOP56O00567 594 aaKnown RBP24.94■■□□□ 1.58
APOE-204ENST00000446996 CDK7P50613 346 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 FOSBP53539 338 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 GUCY1B3Q02153 619 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 PRR16Q569H4 304 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 SEPT1Q8WYJ6 367 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 DPF3Q92784 378 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 VTI1AQ96AJ9 217 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 KATNAL1Q9BW62 490 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 SLC9A2Q9UBY0 812 aa24.94■■□□□ 1.58
APOE-204ENST00000446996 IPO5O00410 1097 aaKnown RBP24.93■■□□□ 1.58
APOE-204ENST00000446996 ATN1P54259 1190 aaPredicted RBP24.93■■□□□ 1.58
APOE-204ENST00000446996 RTP1P59025 263 aa24.93■■□□□ 1.58
APOE-204ENST00000446996 EARS2Q5JPH6 523 aaKnown RBP24.93■■□□□ 1.58
APOE-204ENST00000446996 ANKRD33Q7Z3H0 272 aa24.93■■□□□ 1.58
APOE-204ENST00000446996 ZNF577Q9BSK1 485 aa24.93■■□□□ 1.58
APOE-204ENST00000446996 JPH1Q9HDC5 661 aaPredicted RBP24.93■■□□□ 1.58
APOE-204ENST00000446996 DHX15O43143 795 aaKnown RBP24.92■■□□□ 1.58
APOE-204ENST00000446996 EVI5O60447 810 aa24.92■■□□□ 1.58
APOE-204ENST00000446996 U2AF2P26368 475 aaKnown RBP eCLIP24.92■■□□□ 1.58
APOE-204ENST00000446996 PTPN11Q06124 597 aaPredicted RBP24.92■■□□□ 1.58
APOE-204ENST00000446996 ITGB3BPQ13352 177 aaPredicted RBP24.92■■□□□ 1.58
APOE-204ENST00000446996 ITGA7Q13683 1181 aa24.92■■□□□ 1.58
APOE-204ENST00000446996 LETM2Q2VYF4 491 aa24.92■■□□□ 1.58
APOE-204ENST00000446996 RIT2Q99578 217 aa24.92■■□□□ 1.58
APOE-204ENST00000446996 NR2E3Q9Y5X4 410 aa24.92■■□□□ 1.58
APOE-204ENST00000446996 MSH4O15457 936 aa24.91■■□□□ 1.58
APOE-204ENST00000446996 F2P00734 622 aa24.91■■□□□ 1.58
APOE-204ENST00000446996 PDCP20941 246 aa24.91■■□□□ 1.58
APOE-204ENST00000446996 LARP1BQ659C4 914 aaKnown RBP24.91■■□□□ 1.58
APOE-204ENST00000446996 NFRKBQ6P4R8 1299 aa24.91■■□□□ 1.58
APOE-204ENST00000446996 KAT2BQ92831 832 aa24.91■■□□□ 1.58
APOE-204ENST00000446996 GRIN2DO15399 1336 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 GSTTP1A0A1W2PQM5 241 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 HAS3O00219 553 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 TBX3O15119 743 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 ATG7O95352 703 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 TDP2O95551 362 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 NOSTRINQ8IVI9 506 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 SLC5A5Q92911 643 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 C16orf70Q9BSU1 422 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 PKD2L1Q9P0L9 805 aa24.9■■□□□ 1.58
APOE-204ENST00000446996 DDX25Q9UHL0 483 aaKnown RBP24.9■■□□□ 1.58
APOE-204ENST00000446996 SORBS3O60504 671 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 CCNT1O60563 726 aaKnown RBP24.89■■□□□ 1.58
APOE-204ENST00000446996 LGALS2P05162 132 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 TRAPPC10P48553 1259 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 KRT76Q01546 638 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 ORC2Q13416 577 aaPredicted RBP24.89■■□□□ 1.58
APOE-204ENST00000446996 GNL2Q13823 731 aaKnown RBP24.89■■□□□ 1.58
APOE-204ENST00000446996 PRPF38BQ5VTL8 546 aaKnown RBP24.89■■□□□ 1.58
APOE-204ENST00000446996 ZNF746Q6NUN9 644 aaPredicted RBP24.89■■□□□ 1.58
APOE-204ENST00000446996 SESTD1Q86VW0 696 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 FAM20AQ96MK3 541 aa24.89■■□□□ 1.58
APOE-204ENST00000446996 FAM205CA6NFA0 338 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 DCDC2CA8MYV0 355 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 H3BQV1 296 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 TCF7P36402 384 aaPredicted RBP24.88■■□□□ 1.57
APOE-204ENST00000446996 PSEN2P49810 448 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 NBPF20Q3BBV1 942 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 TRIM60Q495X7 471 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 SMAP1Q8IYB5 467 aaPredicted RBP24.88■■□□□ 1.57
APOE-204ENST00000446996 ETNPPLQ8TBG4 499 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 KCNMB3Q9NPA1 279 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 TCEAL9Q9UHQ7 104 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 ATP11BQ9Y2G3 1177 aa24.88■■□□□ 1.57
APOE-204ENST00000446996 H3BRB1 525 aa24.87■■□□□ 1.57
APOE-204ENST00000446996 TLR3O15455 904 aaKnown RBP24.87■■□□□ 1.57
APOE-204ENST00000446996 LGR5O75473 907 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms