RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 CPSF6Q16630 551 aaKnown RBP eCLIP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PLEKHG6Q3KR16 790 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 CT47A1Q5JQC4 288 aaPredicted RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 NFXL1Q6ZNB6 911 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ASIC4Q96FT7 647 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 SLC52A2Q9HAB3 445 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PRDM5Q9NQX1 630 aaPredicted RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 CCDC39Q9UFE4 941 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ATP8A1Q9Y2Q0 1164 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ALS2Q96Q42 1657 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ARHGEF10O15013 1369 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 HFM1A2PYH4 1435 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 MKI67P46013 3256 aaKnown RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PXDNLA1KZ92 1463 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 GSG1L2A8MUP6 293 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PRR33A8MZF0 331 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 H0Y8X5 98 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 DNAJC8O75937 253 aaPredicted RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PRAMEF1O95521 474 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 FOSL1P15407 271 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ITGB5P18084 799 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 NFKB2Q00653 900 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 NTRK3Q16288 839 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 BRAPQ7Z569 592 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 FGD2Q7Z6J4 655 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 RNF180Q86T96 592 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 LRRTM3Q86VH5 581 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 DDX42Q86XP3 938 aaKnown RBP eCLIP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 C16orf71Q8IYS4 520 aaPredicted RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 MARCH10Q8NA82 808 aaPredicted RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PRPF38AQ8NAV1 312 aaKnown RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 DTWD2Q8NBA8 298 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 TMEM145Q8NBT3 493 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 KCTD13Q8WZ19 329 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 NKX2-4Q9H2Z4 354 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 PRDM11Q9NQV5 511 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 CHST7Q9NS84 486 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
RAB5A-205ENST00000446547 ANGEL1Q9UNK9 670 aaKnown RBP6.44□□□□□ -1.38
RAB5A-205ENST00000446547 QSER1Q2KHR3 1735 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 SIGLEC6O43699 453 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 HOXC12P31275 282 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 ADMP35318 185 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 SOX5P35711 763 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 AMPD2Q01433 879 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 CYP4F3Q08477 520 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 NMIQ13287 307 aaPredicted RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 HABP4Q5JVS0 413 aaKnown RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 FAM214BQ7L5A3 538 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 SHISA5Q8N114 240 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 TCP11L2Q8N4U5 519 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 SMC1BQ8NDV3 1235 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 MFSD14AQ96MC6 490 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 MCMBPQ9BTE3 642 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 METTL14Q9HCE5 456 aaKnown RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 TRIM39Q9HCM9 518 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 MAGEC2Q9UBF1 373 aaPredicted RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 G3BP2Q9UN86 482 aaKnown RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 SF3B6Q9Y3B4 125 aaKnown RBP6.43□□□□□ -1.38
RAB5A-205ENST00000446547 TRAF6Q9Y4K3 522 aa6.43□□□□□ -1.38
RAB5A-205ENST00000446547 IGSF1Q8N6C5 1336 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 PLEKHH1Q9ULM0 1364 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 NRXN1Q9ULB1 1477 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 UNC80Q8N2C7 3258 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 F13BP05160 661 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 PDGFRBP09619 1106 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 JUNBP17275 347 aaPredicted RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 FXR1P51114 621 aaKnown RBP eCLIP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 GABREP78334 506 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 SCRN1Q12765 414 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 MAP4K2Q12851 820 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 GRB10Q13322 594 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 FAM50AQ14320 339 aaKnown RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 GLIPR1L2Q4G1C9 344 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 TRIM61Q5EBN2 209 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 USP53Q70EK8 1073 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 LEO1Q8WVC0 666 aaPredicted RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 DDX1Q92499 740 aaKnown RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 HEXIM2Q96MH2 286 aaKnown RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 TBC1D32Q96NH3 1257 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 ASCC2Q9H1I8 757 aaPredicted RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 CYP26B1Q9NR63 512 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 HOMER2Q9NSB8 354 aa6.42□□□□□ -1.38
RAB5A-205ENST00000446547 TNPO3Q9Y5L0 923 aaKnown RBP6.42□□□□□ -1.38
RAB5A-205ENST00000446547 VCANP13611 3396 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 STXBP3O00186 592 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 OPA1O60313 960 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 CD3EP07766 207 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 ITIH2P19823 946 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 CTSKP43235 329 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 TNK2Q07912 1038 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 ZNF460Q14592 562 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 PCBP1Q15365 356 aaKnown RBP eCLIP6.41□□□□□ -1.38
RAB5A-205ENST00000446547 CLEC16AQ2KHT3 1053 aa6.41□□□□□ -1.38
RAB5A-205ENST00000446547 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms