RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	KIAA1024	Q9UPX6	916 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	BICDL2	A1A5D9	508 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	ERVV-1	B6SEH8	477 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	RAD51C	O43502	376 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	SLC9A1	P19634	815 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	NF2	P35240	595 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	E2F5	Q15329	346 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	TEX11	Q8IYF3	940 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	AEN	Q8WTP8	325 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	LARP4B	Q92615	738 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	NLRP3	Q96P20	1036 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	POTEB3	A0JP26	581 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	ZNF233	A6NK53	670 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	DCDC2C	A8MYV0	355 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	POTEC	B2RU33	542 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	ADCY1	Q08828	1119 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	IK	Q13123	557 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	PPFIA1	Q13136	1202 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	AP1AR	Q63HQ0	302 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	POTEB	Q6S5H4	581 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	N4BP2L2	Q92802	583 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	SPAG5	Q96R06	1193 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	BLOC1S4	Q9NUP1	217 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	PLAA	Q9Y263	795 aa		13.79	□□□□□ -0.2
DDR1-238	ENST00000446312	TOGARAM1	Q9Y4F4	1720 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	ZNF804B	A4D1E1	1349 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	GNPAT	O15228	680 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	SCNN1D	P51172	638 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	ZNF211	Q13398	564 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	FAM83B	Q5T0W9	1011 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	AMOTL1	Q8IY63	956 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	C6orf50	Q9HD87	102 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	BARHL2	Q9NY43	387 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	ANAPC4	Q9UJX5	808 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	PAPPA	Q13219	1627 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	EIF3H	O15372	352 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	5e-6	■■■□□ 14.9
DDR1-238	ENST00000446312	TLR2	O60603	784 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	BTD	P43251	543 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	CNNM4	Q6P4Q7	775 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	SCLT1	Q96NL6	688 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	PNMA5	Q96PV4	448 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	PCDHB13	Q9Y5F0	798 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	SLIT2	O94813	1529 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	MYH7	P12883	1935 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312	FLT1	P17948	1338 aa		13.78	□□□□□ -0.2
DDR1-238	ENST00000446312		A0A1W2PQC6	194 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	HNRNPH1	P31943	449 aa	Known RBP	13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	SLCO1A2	P46721	670 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	KCNMA1	Q12791	1236 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.77	□□□□□ -0.2	3e-6	■□□□□ 9
DDR1-238	ENST00000446312	TUBB2A	Q13885	445 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	UBE4A	Q14139	1066 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	MEA1	Q16626	185 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	C12orf60	Q5U649	245 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	SFMBT2	Q5VUG0	894 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	IQCE	Q6IPM2	695 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	TAF4B	Q92750	862 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	SETDB2	Q96T68	719 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	TUBB2B	Q9BVA1	445 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	AMACR	Q9UHK6	382 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	RTCB	Q9Y3I0	505 aa	Known RBP	13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	ECM29	Q5VYK3	1845 aa		13.77	□□□□□ -0.2
DDR1-238	ENST00000446312	TRAPPC10	P48553	1259 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	CDK8	P49336	464 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	UBXN2A	P68543	259 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	FAM98C	Q17RN3	349 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	USH1G	Q495M9	461 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	KRT79	Q5XKE5	535 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	FAM114A1	Q8IWE2	563 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	SH2D3A	Q9BRG2	576 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	VEZT	Q9HBM0	779 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	MLXIPL	Q9NP71	852 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
DDR1-238	ENST00000446312		A0A087WUV0	522 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	TTC36	A6NLP5	189 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	RASA1	P20936	1047 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	TCP10	Q12799	353 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	CFAP221	Q4G0U5	840 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	DPP8	Q6V1X1	898 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	DNAJC17	Q9NVM6	304 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	PLAGL2	Q9UPG8	496 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	SIK3	Q9Y2K2	1263 aa		13.77	□□□□□ -0.21
DDR1-238	ENST00000446312	POTEF	A5A3E0	1075 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	C6orf229	H3BNL8	230 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	CHMP2A	O43633	222 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	POTEI	P0CG38	1075 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	KCNA1	Q09470	495 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	AADACL2	Q6P093	401 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	POTEG	Q6S5H5	508 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	POTEE	Q6S8J3	1075 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	TAX1BP1	Q86VP1	789 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	LINC00116	Q8NCU8	138 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	TRIM51	Q9BSJ1	452 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	PANK4	Q9NVE7	773 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	BSDC1	Q9NW68	430 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	PKD2L1	Q9P0L9	805 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	TNS2	Q63HR2	1409 aa		13.76	□□□□□ -0.21
DDR1-238	ENST00000446312	GRIN2D	O15399	1336 aa		13.76	□□□□□ -0.21

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