RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 MESDQ14696 234 aa13.19□□□□□ -0.3
APLF-203ENST00000445692 TRADDQ15628 312 aa13.19□□□□□ -0.3
APLF-203ENST00000445692 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
APLF-203ENST00000445692 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
APLF-203ENST00000445692 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
APLF-203ENST00000445692 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 SRGNP10124 158 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 EXOC3L4Q17RC7 722 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 KLHL29Q96CT2 875 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 ACSL3O95573 720 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 MDH1P40925 334 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 ZNF131P52739 623 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 MECOMQ03112 1051 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 ARHGEF2Q92974 986 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 PRPF6O94906 941 aaKnown RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 MMEP08473 750 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 CASP7P55210 303 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 SNAP25P60880 206 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
APLF-203ENST00000445692 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 USTQ9Y2C2 406 aa13.18□□□□□ -0.3
APLF-203ENST00000445692 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
APLF-203ENST00000445692 TDP2O95551 362 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 CTNNA2P26232 953 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 STX2P32856 288 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 ATP11AP98196 1134 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 PRR16Q569H4 304 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 HS2ST1Q7LGA3 356 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.17□□□□□ -0.3
APLF-203ENST00000445692 NKIRAS1Q9NYS0 192 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 DLG5Q8TDM6 1919 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 E9PMD0 336 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 STAT1P42224 750 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
APLF-203ENST00000445692 SEL1L2Q5TEA6 688 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 KIF2BQ8N4N8 673 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 SLC40A1Q9NP59 571 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
APLF-203ENST00000445692 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 DAAM1Q9Y4D1 1078 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 TTI1O43156 1089 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 SP4Q02446 784 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 TCP10Q12799 353 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 MTMR8Q96EF0 704 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 FMO2Q99518 471 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 YIPF3Q9GZM5 350 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 EPN3Q9H201 632 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 ARHGAP20Q9P2F6 1191 aa13.17□□□□□ -0.3
APLF-203ENST00000445692 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 HMGB1P1B2RPK0 211 aaPredicted RBP13.16□□□□□ -0.3
APLF-203ENST00000445692 FOXP2O15409 715 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 UBXN2AP68543 259 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 CETN1Q12798 172 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 NUGGCQ68CJ6 796 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 CASKIN2Q8WXE0 1202 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 WDR19Q8NEZ3 1342 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 ENO4A6NNW6 628 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 SART1O43290 800 aaKnown RBP13.16□□□□□ -0.3
APLF-203ENST00000445692 HAUS3Q68CZ6 603 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 ERMNQ8TAM6 284 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 CYFIP2Q96F07 1278 aa13.16□□□□□ -0.3
APLF-203ENST00000445692 FAM205AQ6ZU69 1335 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 EXOC3O60645 756 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 PPP1R2P41236 205 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 TPH2Q8IWU9 490 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 WHAMMQ8TF30 809 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 DDX25Q9UHL0 483 aaKnown RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 SERPING1P05155 500 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 MXRA7P84157 204 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 PKN1Q16512 942 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 TMEM132AQ24JP5 1023 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
APLF-203ENST00000445692 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
APLF-203ENST00000445692 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms