RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TDRD3Q9H7E2 651 aaKnown RBP19.75■□□□□ 0.75
CLDN9-201ENST00000445369 SAR1BQ9Y6B6 198 aa19.75■□□□□ 0.75
CLDN9-201ENST00000445369 NPHP3-ACAD11A0A0J9YXS1 232 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 ANO9A1A5B4 782 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 SREBF1P36956 1147 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 SPA17Q15506 151 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 BEND6Q5SZJ8 279 aaPredicted RBP19.74■□□□□ 0.75
CLDN9-201ENST00000445369 PITPNM2Q9BZ72 1349 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 EDEM3Q9BZQ6 932 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
CLDN9-201ENST00000445369 ZNF219Q9P2Y4 722 aaPredicted RBP19.74■□□□□ 0.75
CLDN9-201ENST00000445369 LRRC53A6NM62 1247 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 TRAF5O00463 557 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 MAP2K7O14733 419 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 KIF11P52732 1056 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 MARSP56192 900 aaKnown RBP19.74■□□□□ 0.75
CLDN9-201ENST00000445369 FAM193AP78312 1265 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 KCNMA1Q12791 1236 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 KIF5AQ12840 1032 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 PRR16Q569H4 304 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 BTNL9Q6UXG8 535 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 KRT26Q7Z3Y9 468 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 ZC3H3Q8IXZ2 948 aaKnown RBP19.74■□□□□ 0.75
CLDN9-201ENST00000445369 C7orf43Q8WVR3 580 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 KCTD10Q9H3F6 313 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 TBC1D7Q9P0N9 293 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 DUSP10Q9Y6W6 482 aa19.74■□□□□ 0.75
CLDN9-201ENST00000445369 RGPD3A6NKT7 1758 aaPredicted RBP19.73■□□□□ 0.75
CLDN9-201ENST00000445369 RGPD4Q7Z3J3 1758 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 POTEFA5A3E0 1075 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 FOSP01100 380 aaPredicted RBP19.73■□□□□ 0.75
CLDN9-201ENST00000445369 GH2P01242 217 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 RHOXF2BP0C7M4 288 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 POTEIP0CG38 1075 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 BMP3P12645 472 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 ERCC3P19447 782 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 CACNB1Q02641 598 aaPredicted RBP19.73■□□□□ 0.75
CLDN9-201ENST00000445369 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
CLDN9-201ENST00000445369 USH1GQ495M9 461 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 ARSHQ5FYA8 562 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 PDXDC1Q6P996 788 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 POTEGQ6S5H5 508 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 POTEEQ6S8J3 1075 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 SCFD1Q8WVM8 642 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 RHOXF2Q9BQY4 288 aa19.73■□□□□ 0.75
CLDN9-201ENST00000445369 OPLAHO14841 1288 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 KIF20AO95235 890 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CHRNA5P30532 468 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CCDC40Q4G0X9 1142 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 HERC4Q5GLZ8 1057 aaPredicted RBP19.72■□□□□ 0.75
CLDN9-201ENST00000445369 RBM26Q5T8P6 1007 aaKnown RBP19.72■□□□□ 0.75
CLDN9-201ENST00000445369 RRAGAQ7L523 313 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CATSPER3Q86XQ3 398 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CCDC155Q8N6L0 562 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 NEK11Q8NG66 645 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 SECISBP2LQ93073 1101 aaKnown RBP19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 SMCHD1A6NHR9 2005 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 SPDYE3A6NKU9 549 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 FAM86B1E9PN63 330 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 ERLIN1O75477 346 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 GNA14O95837 355 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 TUBBP07437 444 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 FAM86B2P0C5J1 330 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 CIITAP33076 1130 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 EIF4A3P38919 411 aaKnown RBP19.72■□□□□ 0.75
CLDN9-201ENST00000445369 VSNL1P62760 191 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 IFIH1Q9BYX4 1025 aaKnown RBP19.72■□□□□ 0.75
CLDN9-201ENST00000445369 TANGO6Q9C0B7 1094 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 SYNPO2Q9UMS6 1093 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 PCDHA13Q9Y5I0 950 aa19.72■□□□□ 0.75
CLDN9-201ENST00000445369 MACROD2A1Z1Q3 448 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 SPATA31C1P0DKV0 1188 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 RPA1P27694 616 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 IKQ13123 557 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 SMC1AQ14683 1233 aaKnown RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 ZNF771Q7L3S4 317 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 TRIM59Q8IWR1 403 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 NELFCDQ8IXH7 590 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 ERMNQ8TAM6 284 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 SMCR8Q8TEV9 937 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 PRMT6Q96LA8 375 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 SH2D4AQ9H788 454 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 EMILIN3Q9NT22 766 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 A0A1W2PRG0 241 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 USO1O60763 962 aaKnown RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 SRGAP2O75044 1071 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 TAL1P17542 331 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 ASTE1Q2TB18 679 aaPredicted RBP19.71■□□□□ 0.75
CLDN9-201ENST00000445369 FAM20AQ96MK3 541 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 MMS19Q96T76 1030 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 CEP72Q9P209 647 aa19.71■□□□□ 0.75
CLDN9-201ENST00000445369 KIF13BQ9NQT8 1826 aa19.7■□□□□ 0.74
CLDN9-201ENST00000445369 YDJCA8MPS7 323 aa19.7■□□□□ 0.74
CLDN9-201ENST00000445369 KRT18P05783 430 aaKnown RBP19.7■□□□□ 0.74
CLDN9-201ENST00000445369 CKAP4Q07065 602 aaKnown RBP19.7■□□□□ 0.74
CLDN9-201ENST00000445369 RAD51AP2Q09MP3 1159 aa19.7■□□□□ 0.74
CLDN9-201ENST00000445369 MAPK8IP2Q13387 824 aaPredicted RBP19.7■□□□□ 0.74
CLDN9-201ENST00000445369 EDRF1Q3B7T1 1238 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms