RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PPP4R3AQ6IN85 833 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 NOSTRINQ8IVI9 506 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 CRYGNQ8WXF5 182 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 FERMT2Q96AC1 680 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 MTG1Q9BT17 334 aaPredicted RBP15.98■□□□□ 0.15
SSBP3-208ENST00000444533 SEZ6LQ9BYH1 1024 aa15.98■□□□□ 0.15
SSBP3-208ENST00000444533 AGO4Q9HCK5 861 aaKnown RBP15.98■□□□□ 0.15
SSBP3-208ENST00000444533 NFASCO94856 1347 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 ELP1O95163 1332 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 FRMPD3Q5JV73 1810 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 CYP3A7-CYP3A51PA0A087WV96 503 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 A0A1W2PQ45 241 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-208ENST00000444533 A0A1W2PQY0 241 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 VPS37CA5D8V6 355 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-208ENST00000444533 MYADML2A6NDP7 307 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 MMP3P08254 477 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 ARP10275 920 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 KCNA2P16389 499 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 CYP3A7P24462 503 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 SP2Q02086 613 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 MLLT1Q03111 559 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-208ENST00000444533 Q4G0T1 1027 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 TMEM63BQ5T3F8 832 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 DIS3LQ8TF46 1054 aaKnown RBP15.97■□□□□ 0.15
SSBP3-208ENST00000444533 SLC9A2Q9UBY0 812 aa15.97■□□□□ 0.15
SSBP3-208ENST00000444533 ZNF215Q9UL58 517 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-208ENST00000444533 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 A0A0U1RQG5 324 aaPredicted RBP15.96■□□□□ 0.15
SSBP3-208ENST00000444533 GAS7O60861 476 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 TRAPPC10P48553 1259 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 RGS19P49795 217 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 CHMP4BP1P59074 171 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 SEMA3FQ13275 785 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 CXCL17Q6UXB2 119 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 SEPT1Q8WYJ6 367 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 DPF3Q92784 378 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 TNPO1Q92973 898 aaKnown RBP15.96■□□□□ 0.15
SSBP3-208ENST00000444533 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
SSBP3-208ENST00000444533 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 ATP9AO75110 1047 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 TDP2O95551 362 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 COL6A1P12109 1028 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 U2AF2P26368 475 aaKnown RBP eCLIP15.95■□□□□ 0.14
SSBP3-208ENST00000444533 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-208ENST00000444533 PURAQ00577 322 aaKnown RBP15.95■□□□□ 0.14
SSBP3-208ENST00000444533 KRT76Q01546 638 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-208ENST00000444533 HSDL1Q3SXM5 330 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 LRCH2Q5VUJ6 765 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
SSBP3-208ENST00000444533 SLFN12Q8IYM2 578 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 TNFRSF25Q93038 417 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 FAM20AQ96MK3 541 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 RIT2Q99578 217 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 TEKT3Q9BXF9 490 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 SAMM50Q9Y512 469 aa15.95■□□□□ 0.14
SSBP3-208ENST00000444533 MYH7BA7E2Y1 1941 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 DDX39AO00148 427 aaKnown RBP15.94■□□□□ 0.14
SSBP3-208ENST00000444533 TBX3O15119 743 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 CTAGE5O15320 804 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 TLR3O15455 904 aaKnown RBP15.94■□□□□ 0.14
SSBP3-208ENST00000444533 EVI5O60447 810 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 NEMFO60524 1076 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 PTGS1P23219 599 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 ANP32AP39687 249 aaKnown RBP15.94■□□□□ 0.14
SSBP3-208ENST00000444533 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 MIS18BP1Q6P0N0 1132 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 SLC39A5Q6ZMH5 540 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 UBE2Q1Q7Z7E8 422 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 SMAP1Q8IYB5 467 aaPredicted RBP15.94■□□□□ 0.14
SSBP3-208ENST00000444533 GLG1Q92896 1179 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 GPR20Q99678 358 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 PRKAG2Q9UGJ0 569 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 NR2E3Q9Y5X4 410 aa15.94■□□□□ 0.14
SSBP3-208ENST00000444533 DCDC2CA8MYV0 355 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 BACH1O14867 736 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 MSH4O15457 936 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 MCM7P33993 719 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 TCF7P36402 384 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-208ENST00000444533 MNX1P50219 401 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-208ENST00000444533 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-208ENST00000444533 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 CALCRLQ16602 461 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 FAM47CQ5HY64 1035 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 TTC38Q5R3I4 469 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
SSBP3-208ENST00000444533 FAM160B1Q5W0V3 765 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 ZNF746Q6NUN9 644 aaPredicted RBP15.93■□□□□ 0.14
SSBP3-208ENST00000444533 C7orf31Q8N865 590 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 SPRYD3Q8NCJ5 442 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 SMARCAD1Q9H4L7 1026 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 ATP11BQ9Y2G3 1177 aa15.93■□□□□ 0.14
SSBP3-208ENST00000444533 BRCA2P51587 3418 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 WDR64B1ANS9 1081 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 H3BRB1 525 aa15.92■□□□□ 0.14
SSBP3-208ENST00000444533 ARVCFO00192 962 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms