RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 C12orf60Q5U649 245 aa12.77□□□□□ -0.36
HCFC1-203ENST00000444191 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.36
HCFC1-203ENST00000444191 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.36
HCFC1-203ENST00000444191 MYH10P35580 1976 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
HCFC1-203ENST00000444191 NFIXQ14938 502 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 NPY5RQ15761 445 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 CCSER1Q9C0I3 900 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 KDM3BQ7LBC6 1761 aa12.77□□□□□ -0.37
HCFC1-203ENST00000444191 A0A087X0T9 212 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 FAM228BP0C875 321 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
HCFC1-203ENST00000444191 KCNB1Q14721 858 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 GRIK5Q16478 980 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 RCSD1Q6JBY9 416 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
HCFC1-203ENST00000444191 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 CREG2Q8IUH2 290 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 LRRC27Q9C0I9 530 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 KCNK9Q9NPC2 374 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 GEMIN8Q9NWZ8 242 aaKnown RBP12.76□□□□□ -0.37
HCFC1-203ENST00000444191 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 GGT7Q9UJ14 662 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 RCAN1P53805 252 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 EMBQ6PCB8 327 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 TPH2Q8IWU9 490 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 ARFGAP2Q8N6H7 521 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 CNBD1Q8NA66 436 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 AK8Q96MA6 479 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.375e-7■■□□□ 12.6
HCFC1-203ENST00000444191 ORC4O43929 436 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 FAM13AO94988 1023 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 MAP2K2P36507 400 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 PLTPP55058 493 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 COASYQ13057 564 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 GRM4Q14833 912 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 ALKBH5Q6P6C2 394 aaKnown RBP12.76□□□□□ -0.37
HCFC1-203ENST00000444191 UNC13DQ70J99 1090 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 CELF4Q9BZC1 486 aaKnown RBP12.76□□□□□ -0.37
HCFC1-203ENST00000444191 MLXIPLQ9NP71 852 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 CD2APQ9Y5K6 639 aa12.76□□□□□ -0.37
HCFC1-203ENST00000444191 DAPK3O43293 454 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 RAD51CO43502 376 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 KLRC4O43908 158 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 SLC9A1P19634 815 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 GJB7Q6PEY0 223 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PHLDB2Q86SQ0 1253 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 GBP2P32456 591 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 IFI16Q16666 785 aaKnown RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 MSL1Q68DK7 614 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 KCNK18Q7Z418 384 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PIGOQ8TEQ8 1089 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 SALL4Q9UJQ4 1053 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 H2AFZP0C0S5 128 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PLA2G4BP0C869 781 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 HOXA13P31271 388 aaPredicted RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 PDE6BP35913 854 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 HAUS3Q68CZ6 603 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 H2AFVQ71UI9 128 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 ZNF507Q8TCN5 953 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 CUL5Q93034 780 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 TACO1Q9BSH4 297 aaKnown RBP12.75□□□□□ -0.37
HCFC1-203ENST00000444191 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
HCFC1-203ENST00000444191 USP17L10C9JJH3 530 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 FLOT1O75955 427 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 CLTAP09496 248 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-203ENST00000444191 NF2P35240 595 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 PPP1R2P41236 205 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
HCFC1-203ENST00000444191 PDXDC1Q6P996 788 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 ANKRD42Q8N9B4 389 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 MTA3Q9BTC8 594 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 CUEDC2Q9H467 287 aa12.74□□□□□ -0.37
HCFC1-203ENST00000444191 VIPAS39Q9H9C1 493 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms