RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 RSPH10B2B2RC85 870 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 GJB5O95377 273 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 RSPH10BP0C881 870 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 SRBD1Q8N5C6 995 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 GPKOWQ92917 476 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 GPR20Q99678 358 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 PSTPIP2Q9H939 334 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 MTCH2Q9Y6C9 303 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
CTDSP1-204ENST00000443891 SMIM10L2AP0DMW4 78 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 SMIM10L2BP0DMW5 78 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 CCDC85BQ15834 202 aaPredicted RBP18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 USP17L6PQ6QN14 398 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 SYNE3Q6ZMZ3 975 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 CYFIP1Q7L576 1253 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 FANCBQ8NB91 859 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 IL27Q8NEV9 243 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 MYL10Q9BUA6 226 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 EHMT1Q9H9B1 1298 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 RTEL1Q9NZ71 1219 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 COG5Q9UP83 839 aa18.77■□□□□ 0.6
CTDSP1-204ENST00000443891 PRUNE2Q8WUY3 3088 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 TNFRSF10AO00220 468 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 THPOP40225 353 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 ZNF200P98182 395 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 PIBF1Q8WXW3 757 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 RNPEPQ9H4A4 650 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 ANO2Q9NQ90 1003 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 PRDM6Q9NQX0 595 aa18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 RBM28Q9NW13 759 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 BAZ2BQ9UIF8 2168 aaKnown RBP18.76■□□□□ 0.59
CTDSP1-204ENST00000443891 NRCAMQ92823 1304 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 TRIP12Q14669 1992 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 MYH7BA7E2Y1 1941 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 AMHP03971 560 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 RPLP2P05387 115 aaKnown RBP18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 HIC1Q14526 733 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 MBTPS1Q14703 1052 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 TSGA10IPQ3SY00 556 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 CENPQQ7L2Z9 268 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 RPAINQ86UA6 219 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 TET1Q8NFU7 2136 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 ARNTL2Q8WYA1 636 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 WNT8BQ93098 351 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 INSL6Q9Y581 213 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 TTC28Q96AY4 2481 aa18.75■□□□□ 0.59
CTDSP1-204ENST00000443891 SPDYE3A6NKU9 549 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 SORBS3O60504 671 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 ERVK-21P61565 698 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 DEFB103AP81534 67 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 SEPT8Q92599 483 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 APBB2Q92870 758 aa18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 TGS1Q96RS0 853 aaKnown RBP18.74■□□□□ 0.59
CTDSP1-204ENST00000443891 VCANP13611 3396 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 TREHO43280 583 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 RCAN1P53805 252 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 ADAM17P78536 824 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 KRT32Q14532 448 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 FAM26DQ5JW98 314 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 TAF2Q6P1X5 1199 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 DBF4BQ8NFT6 615 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 SEPT1Q8WYJ6 367 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 GLT8D2Q9H1C3 349 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 BCAS3Q9H6U6 928 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 UBIAD1Q9Y5Z9 338 aa18.73■□□□□ 0.59
CTDSP1-204ENST00000443891 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 KCNA2P16389 499 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 GRB10Q13322 594 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 ADAMTS19Q8TE59 1207 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 SAMD11Q96NU1 681 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 CERS4Q9HA82 394 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 CHD7Q9P2D1 2997 aa18.72■□□□□ 0.59
CTDSP1-204ENST00000443891 EPOPA6NHQ4 379 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 RFXAPO00287 272 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 ARHGEF15O94989 841 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 HTRA4P83105 476 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 EXOSC10Q01780 885 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 MTMR1Q13613 665 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 SKIV2LQ15477 1246 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 APOA5Q6Q788 366 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 DHX32Q7L7V1 743 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 RSPH3Q86UC2 560 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 SMARCAD1Q9H4L7 1026 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms