RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 C11orf57Q6ZUT1 292 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 USP49Q70CQ1 688 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 OTUD6AQ7L8S5 288 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ARMC9Q7Z3E5 817 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SAMD7Q7Z3H4 446 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FILIP1Q7Z7B0 1213 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF467Q7Z7K2 595 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ANKRD23Q86SG2 305 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 NLRX1Q86UT6 975 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 LUZP1Q86V48 1076 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SLC9A9Q8IVB4 645 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 VSTM4Q8IW00 320 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 LRRC8AQ8IWT6 810 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 C12orf56Q8IXR9 622 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 C4orf19Q8IY42 314 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 REM2Q8IYK8 340 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TXLNBQ8N3L3 684 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 AOPEPQ8N6M6 819 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 RNF214Q8ND24 703 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF507Q8TCN5 953 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ACER1Q8TDN7 264 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 MORC4Q8TE76 937 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SNX29Q8TEQ0 813 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 CLEC4DQ8WXI8 215 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 RAD54LQ92698 747 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SYN2Q92777 582 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 DNAJC19Q96DA6 116 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 HHIPL1Q96JK4 782 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FAM81BQ96LP2 452 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PRIMPOLQ96LW4 560 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 INPP4AQ96PE3 977 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PANX2Q96RD6 677 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ERGIC2Q96RQ1 377 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 WRNIP1Q96S55 665 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 MTRQ99707 1265 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TUBB2BQ9BVA1 445 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TEKT3Q9BXF9 490 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PANK2Q9BZ23 570 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZMYND15Q9H091 742 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 HSD3B7Q9H2F3 369 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZSWIM4Q9H7M6 989 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ACAD9Q9H845 621 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 METTL14Q9HCE5 456 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 EMILIN3Q9NT22 766 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 BLOC1S4Q9NUP1 217 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 EXOC1Q9NV70 894 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 LARSQ9P2J5 1176 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF219Q9P2Y4 722 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TCEAL9Q9UHQ7 104 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 VAV3Q9UKW4 847 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 CCPG1Q9ULG6 757 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 MYO6Q9UM54 1294 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TRAF3IP3Q9Y228 551 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 DIS3Q9Y2L1 958 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 NFE2L3Q9Y4A8 694 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 CTDP1Q9Y5B0 961 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PAXBP1Q9Y5B6 917 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PCDHB13Q9Y5F0 798 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PCDHAC2Q9Y5I4 1007 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 COL4A3BPQ9Y5P4 624 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GJA3Q9Y6H8 435 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZHX2Q9Y6X8 837 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SYNRGQ9UMZ2 1314 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 POLR2AP24928 1970 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 COL11A1P12107 1806 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF236Q9UL36 1845 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SSC5DA1L4H1 1573 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SHTN1A0MZ66 631 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TESPA1A2RU30 521 aaPredicted RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 WDR64B1ANS9 1081 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SPATA31C2B4DYI2 1134 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FAM86B1E9PN63 330 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 WNT7AO00755 349 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SLC16A3O15427 465 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 P4HA2O15460 535 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 DHX15O43143 795 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ZSCAN12O43309 604 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SLC37A4O43826 429 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 GAS7O60861 476 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PPFIA3O75145 1194 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 OFD1O75665 1012 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CAPN15O75808 1086 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FLOT1O75955 427 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SLITRK3O94933 977 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 TDP2O95551 362 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CFBP00751 764 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PTMAP06454 111 aaKnown RBP3.14□□□□□ -1.91
LINC00393-201ENST00000443621 FAM86B2P0C5J1 330 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 PLA2G4BP0C869 781 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 SPATA31C1P0DKV0 1188 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CYP11B2P19099 503 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 ATP2B1P20020 1258 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 OSBPP22059 807 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 RFX1P22670 979 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 CCND2P30279 289 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 INPP5BP32019 993 aa3.14□□□□□ -1.91
LINC00393-201ENST00000443621 EPHX2P34913 555 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms