RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LRRC24Q50LG9 513 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 U2AF1L4Q8WU68 220 aaKnown RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 PUS3Q9BZE2 481 aaKnown RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 DPPA5A6NC42 116 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 ABLIM1O14639 778 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 MAPK13O15264 365 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 PTPROQ16827 1216 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 SYN2Q92777 582 aaPredicted RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 A0A087X0B3 334 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 F8VZ95 297 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 UBE2Q2LH0YL09 131 aa5.46□□□□□ -1.53
HERC1-201ENST00000443617 ZNF268Q14587 947 aaPredicted RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 DRAXINQ8NBI3 349 aaPredicted RBP5.46□□□□□ -1.53
HERC1-201ENST00000443617 DESP17661 470 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 HNRNPH3P31942 346 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 RCAN1P53805 252 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 RNF168Q8IYW5 571 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 SETBP1Q9Y6X0 1596 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 GNA14O95837 355 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 BICDL1Q6ZP65 573 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 DDX42Q86XP3 938 aaKnown RBP eCLIP5.46□□□□□ -1.54
HERC1-201ENST00000443617 ARHGEF2Q92974 986 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 RPS6KC1Q96S38 1066 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 LRRC53A6NM62 1247 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 RAB27AP51159 221 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZC3H18Q86VM9 953 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 VCX3BQ9H321 246 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 VCX3AQ9NNX9 186 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ABCF3Q9NUQ8 709 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 AMFRQ9UKV5 643 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 PI16Q6UXB8 463 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 UHMK1Q8TAS1 419 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 MCUR1Q96AQ8 359 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 EDEM3Q9BZQ6 932 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 C5orf60A6NFR6 353 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 UQCRFS1P1P0C7P4 283 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 IL9RQ01113 521 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 TTI2Q6NXR4 508 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 USP38Q8NB14 1042 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZNF496Q96IT1 587 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 STOML1Q9UBI4 398 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZNF532Q9HCE3 1301 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 NPTXRO95502 500 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 ARL6IP4Q66PJ3 421 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 ERGIC2Q96RQ1 377 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 XDHP47989 1333 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZSCAN5CA6NGD5 496 aaPredicted RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 H0YGN5 161 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZNF790Q6PG37 636 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 SLC17A8Q8NDX2 589 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 NFS1Q9Y697 457 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 CALB2P22676 271 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 PMS2P54278 862 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 FAM83BQ5T0W9 1011 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 KCNH5Q8NCM2 988 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 TMEM60Q9H2L4 133 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 CNOT8Q9UFF9 292 aaKnown RBP5.46□□□□□ -1.54
HERC1-201ENST00000443617 JCADQ9P266 1359 aa5.46□□□□□ -1.54
HERC1-201ENST00000443617 PPP1R21Q6ZMI0 780 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GALNT15Q8N3T1 639 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GLG1Q92896 1179 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ZHX3Q9H4I2 956 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 NLRC4Q9NPP4 1024 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PLAGL2Q9UPG8 496 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TRIM33Q9UPN9 1127 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 SNX24Q9Y343 169 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.45□□□□□ -1.546e-6■■■■□ 21.5
HERC1-201ENST00000443617 GSTTP1A0A1W2PQM5 241 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 FAM200BP0CF97 657 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 MAN2A1Q16706 1144 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PIGWQ7Z7B1 504 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ZSWIM5Q9P217 1185 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 TMEM110-MUSTN1A8MSY1 372 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ACADSP16219 412 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PMS1P54277 932 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 MKRN3Q13064 507 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 ACBD5Q5T8D3 534 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 RNPEPL1Q9HAU8 725 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 OPHN1O60890 802 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 DISC1Q9NRI5 854 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 MTUS1Q9ULD2 1270 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 H2AFZP0C0S5 128 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ITGA4P13612 1032 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 H2AFVQ71UI9 128 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 CNBD1Q8NA66 436 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 ARMT1Q9H993 441 aa5.45□□□□□ -1.54
HERC1-201ENST00000443617 NOC2LQ9Y3T9 749 aaKnown RBP5.45□□□□□ -1.54
HERC1-201ENST00000443617 PLCG1P19174 1290 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms