RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 RETREG2Q8NC44 543 aa15□□□□□ -0.01
TOM1-208ENST00000443206 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.015e-11■□□□□ 10.1
TOM1-208ENST00000443206 ZMYND12Q9H0C1 365 aa15□□□□□ -0.01
TOM1-208ENST00000443206 BCAS3Q9H6U6 928 aa15□□□□□ -0.01
TOM1-208ENST00000443206 IL23AQ9NPF7 189 aa15□□□□□ -0.01
TOM1-208ENST00000443206 JADE2Q9NQC1 790 aa15□□□□□ -0.01
TOM1-208ENST00000443206 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
TOM1-208ENST00000443206 H3BRB1 525 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 HAS3O00219 553 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 PPFIA3O75145 1194 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 ACRP10323 421 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 ZNF76P36508 570 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 CLK2P49760 499 aaKnown RBP14.99□□□□□ -0.01
TOM1-208ENST00000443206 SP4Q02446 784 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 STK3Q13188 491 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 ANKRD1Q15327 319 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 TMEM240Q5SV17 173 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 GDF6Q6KF10 455 aaPredicted RBP14.99□□□□□ -0.01
TOM1-208ENST00000443206 PSRC1Q6PGN9 363 aaPredicted RBP14.99□□□□□ -0.01
TOM1-208ENST00000443206 CCDC155Q8N6L0 562 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 GPR20Q99678 358 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 MXRA8Q9BRK3 442 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 C16orf70Q9BSU1 422 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 TUT1Q9H6E5 874 aaKnown RBP14.99□□□□□ -0.01
TOM1-208ENST00000443206 TMEM260Q9NX78 707 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 GTF2IRD1Q9UHL9 959 aa14.99□□□□□ -0.01
TOM1-208ENST00000443206 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 ATP9AO75110 1047 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 FGBP02675 491 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 LGALS2P05162 132 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 KCNA2P16389 499 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 SREBF1P36956 1147 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 CEP55Q53EZ4 464 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 C16orf59Q7L2K0 433 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 REXO1Q8N1G1 1221 aaKnown RBP14.98□□□□□ -0.01
TOM1-208ENST00000443206 SCLYQ96I15 445 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 MTIF3Q9H2K0 278 aaKnown RBP14.98□□□□□ -0.01
TOM1-208ENST00000443206 SH3GLB2Q9NR46 395 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 SCN5AQ14524 2016 aa14.98□□□□□ -0.01
TOM1-208ENST00000443206 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 CDKL5O76039 1030 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 NLRP5P59047 1200 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 SMAD3P84022 425 aaKnown RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 UTP14CQ5TAP6 766 aaKnown RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 DEFB123Q8N688 67 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 CAGE1Q8TC20 777 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 SEPT1Q8WYJ6 367 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 PKD2L1Q9P0L9 805 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 ZNF215Q9UL58 517 aaPredicted RBP14.97□□□□□ -0.01
TOM1-208ENST00000443206 MYO9BQ13459 2157 aa14.97□□□□□ -0.01
TOM1-208ENST00000443206 DEXIO95424 95 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 PFKMP08237 780 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 RFC2P35250 354 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 PTK7Q13308 1070 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 SDF4Q9BRK5 362 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 VPS54Q9P1Q0 977 aa14.96□□□□□ -0.01
TOM1-208ENST00000443206 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 MEIS1O00470 390 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 SEC24BO95487 1268 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 CYP3A4P08684 503 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 GNAT1P11488 350 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 TCF7P36402 384 aaPredicted RBP14.95□□□□□ -0.02
TOM1-208ENST00000443206 AK2P54819 239 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 FAM109BQ6ICB4 259 aaPredicted RBP14.95□□□□□ -0.02
TOM1-208ENST00000443206 NIPA1Q7RTP0 329 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 OTOP2Q7RTS6 562 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 DEFB128Q7Z7B8 93 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 CYP2W1Q8TAV3 490 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 AFAP1L1Q8TED9 768 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 HERVK_113Q902F9 699 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 IL17RAQ96F46 866 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 JPH1Q9HDC5 661 aaPredicted RBP14.95□□□□□ -0.02
TOM1-208ENST00000443206 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 TPCN1Q9ULQ1 816 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 TET1Q8NFU7 2136 aa14.95□□□□□ -0.02
TOM1-208ENST00000443206 NFASCO94856 1347 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 PFKFB2O60825 505 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 PARNO95453 639 aaKnown RBP14.94□□□□□ -0.02
TOM1-208ENST00000443206 SMIM10L2AP0DMW4 78 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 SMIM10L2BP0DMW5 78 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 ARP10275 920 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 ACTN1P12814 892 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 NEK4P51957 841 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 ZNF200P98182 395 aaPredicted RBP14.94□□□□□ -0.02
TOM1-208ENST00000443206 SCRN1Q12765 414 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 ZNF697Q5TEC3 545 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 Q7L0L9 218 aa14.94□□□□□ -0.02
TOM1-208ENST00000443206 PLA2G4DQ86XP0 818 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms