RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 FOSP01100 380 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-204ENST00000442975 AP3B2Q13367 1082 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 BFSP2Q13515 415 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 UTP14CQ5TAP6 766 aaKnown RBP24.08■■□□□ 1.45
CDKN3-204ENST00000442975 JAKMIP3Q5VZ66 844 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 TEX2Q8IWB9 1127 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 CCDC155Q8N6L0 562 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 GIMAP8Q8ND71 665 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-204ENST00000442975 SENP7Q9BQF6 1050 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 C16orf70Q9BSU1 422 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 RNF26Q9BY78 433 aaPredicted RBP24.08■■□□□ 1.45
CDKN3-204ENST00000442975 JADE2Q9NQC1 790 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 TELO2Q9Y4R8 837 aa24.08■■□□□ 1.45
CDKN3-204ENST00000442975 PITPNM1O00562 1244 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 KCNA2P16389 499 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 IFNAR1P17181 557 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 SMAD3P84022 425 aaKnown RBP24.07■■□□□ 1.44
CDKN3-204ENST00000442975 NTRK3Q16288 839 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 PKN1Q16512 942 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 OTOP2Q7RTS6 562 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 DEFB128Q7Z7B8 93 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 FAM161BQ96MY7 647 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 MTIF3Q9H2K0 278 aaKnown RBP24.07■■□□□ 1.44
CDKN3-204ENST00000442975 C6orf50Q9HD87 102 aa24.07■■□□□ 1.44
CDKN3-204ENST00000442975 H3BRB1 525 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 ATP9AO75110 1047 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 ZNF697Q5TEC3 545 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 TRIM22Q8IYM9 498 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 REXO1Q8N1G1 1221 aaKnown RBP24.06■■□□□ 1.44
CDKN3-204ENST00000442975 CTAGE1Q96RT6 745 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 TUT1Q9H6E5 874 aaKnown RBP24.06■■□□□ 1.44
CDKN3-204ENST00000442975 VPS54Q9P1Q0 977 aa24.06■■□□□ 1.44
CDKN3-204ENST00000442975 ZNF215Q9UL58 517 aaPredicted RBP24.06■■□□□ 1.44
CDKN3-204ENST00000442975 ESYT2A0FGR8 921 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 FGBP02675 491 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 ZNF76P36508 570 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 SREBF1P36956 1147 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 CLK2P49760 499 aaKnown RBP24.05■■□□□ 1.44
CDKN3-204ENST00000442975 FAM109BQ6ICB4 259 aaPredicted RBP24.05■■□□□ 1.44
CDKN3-204ENST00000442975 RPUSD2Q8IZ73 545 aaKnown RBP24.05■■□□□ 1.44
CDKN3-204ENST00000442975 CCDC148Q8NFR7 591 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 CYP2W1Q8TAV3 490 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 CAGE1Q8TC20 777 aa24.05■■□□□ 1.44
CDKN3-204ENST00000442975 DHX38Q92620 1227 aaKnown RBP24.05■■□□□ 1.44
CDKN3-204ENST00000442975 ZBBXA8MT70 800 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 ANAPC15P60006 121 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 ARHGAP4P98171 946 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 ZNF200P98182 395 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-204ENST00000442975 CEP55Q53EZ4 464 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 CPLX2Q6PUV4 134 aaKnown RBP24.04■■□□□ 1.44
CDKN3-204ENST00000442975 HERVK_113Q902F9 699 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 ZNF274Q96GC6 653 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-204ENST00000442975 MXRA8Q9BRK3 442 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 ZMYND12Q9H0C1 365 aa24.04■■□□□ 1.44
CDKN3-204ENST00000442975 CXXC1Q9P0U4 656 aaPredicted RBP24.04■■□□□ 1.44
CDKN3-204ENST00000442975 C17orf102A2RUQ5 167 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 ADAMTS3O15072 1205 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 PFKMP08237 780 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 IQCF3P0C7M6 154 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 SMIM10L2AP0DMW4 78 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 SMIM10L2BP0DMW5 78 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 GNA11P29992 359 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 TCF7P36402 384 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-204ENST00000442975 SSRP1Q08945 709 aaKnown RBP24.03■■□□□ 1.44
CDKN3-204ENST00000442975 RASGRP4Q8TDF6 673 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 AFAP1L1Q8TED9 768 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 JPH1Q9HDC5 661 aaPredicted RBP24.03■■□□□ 1.44
CDKN3-204ENST00000442975 KCNH7Q9NS40 1196 aa24.03■■□□□ 1.44
CDKN3-204ENST00000442975 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.02■■□□□ 1.44
CDKN3-204ENST00000442975 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.02■■□□□ 1.44
CDKN3-204ENST00000442975 EIF5BO60841 1220 aaKnown RBP24.02■■□□□ 1.44
CDKN3-204ENST00000442975 RFC2P35250 354 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 HIC1Q14526 733 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 RASIP1Q5U651 963 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 LRRC8DQ7L1W4 858 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 SDF4Q9BRK5 362 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 FTOQ9C0B1 505 aaKnown RBP eCLIP24.02■■□□□ 1.44
CDKN3-204ENST00000442975 MTMR10Q9NXD2 777 aa24.02■■□□□ 1.44
CDKN3-204ENST00000442975 GRXCR1A8MXD5 290 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 ARP10275 920 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 SELPP16109 830 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 PTK7Q13308 1070 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 BICD2Q8TD16 824 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 WNT8BQ93098 351 aa24.01■■□□□ 1.43
CDKN3-204ENST00000442975 MAFGO15525 162 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 DNAJB2P25686 324 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 MARK3P27448 753 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 NLRP5P59047 1200 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 MCTP2Q6DN12 878 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 SEPT1Q8WYJ6 367 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 GLG1Q92896 1179 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 ATP6V0A1Q93050 837 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 VWCEQ96DN2 955 aa24■■□□□ 1.43
CDKN3-204ENST00000442975 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
CDKN3-204ENST00000442975 AGO4Q9HCK5 861 aaKnown RBP24■■□□□ 1.43
CDKN3-204ENST00000442975 CDKL5O76039 1030 aa23.99■■□□□ 1.43
CDKN3-204ENST00000442975 DEXIO95424 95 aa23.99■■□□□ 1.43
CDKN3-204ENST00000442975 CKBP12277 381 aa23.99■■□□□ 1.43
CDKN3-204ENST00000442975 ACTN1P12814 892 aa23.99■■□□□ 1.43
CDKN3-204ENST00000442975 SETD4Q9NVD3 440 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms