RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
LINC00299-202ENST00000442956 ZNF408Q9H9D4 720 aa16.33■□□□□ 0.2
LINC00299-202ENST00000442956 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.2
LINC00299-202ENST00000442956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00299-202ENST00000442956 WDR90Q96KV7 1748 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
LINC00299-202ENST00000442956 UBASH3AP57075 661 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 STK4Q13043 487 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 STIM1Q13586 685 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 RIT2Q99578 217 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
LINC00299-202ENST00000442956 TEKT3Q9BXF9 490 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
LINC00299-202ENST00000442956 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
LINC00299-202ENST00000442956 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.32■□□□□ 0.2
LINC00299-202ENST00000442956 RGL1Q9NZL6 768 aa16.32■□□□□ 0.2
LINC00299-202ENST00000442956 PEX10O60683 326 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 FCER1AP12319 257 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 IDEP14735 1019 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 PSMC6P62333 389 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 MTMR1Q13613 665 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 HPS3Q969F9 1004 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 HSD17B14Q9BPX1 270 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
LINC00299-202ENST00000442956 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 PKD2L1Q9P0L9 805 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 PSMA7O14818 248 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 PTGS1P23219 599 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 TPD52L1Q16890 204 aaPredicted RBP16.31■□□□□ 0.2
LINC00299-202ENST00000442956 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
LINC00299-202ENST00000442956 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
LINC00299-202ENST00000442956 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 TPM3P06753 285 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 SLC12A3P55017 1021 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 B3GNT9Q6UX72 402 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 NAP1L5Q96NT1 182 aaPredicted RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 MSNP26038 577 aaKnown RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 MOGSQ13724 837 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 CTTNQ14247 550 aaKnown RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 CDKAL1Q5VV42 579 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 XRRA1Q6P2D8 792 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 VSIG10LQ86VR7 867 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 KIAA0895Q8NCT3 520 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 CHST13Q8NET6 341 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
LINC00299-202ENST00000442956 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 COL11A1P12107 1806 aaPredicted RBP16.3■□□□□ 0.2
LINC00299-202ENST00000442956 PTPRFP10586 1907 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 SLITRK3O94933 977 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 NR3C2P08235 984 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 CYP11B2P19099 503 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 CCND2P30279 289 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 GJA5P36382 358 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 HERVK_113P62684 666 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 FASTKD5Q7L8L6 764 aaKnown RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 FILIP1Q7Z7B0 1213 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 TPH2Q8IWU9 490 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
LINC00299-202ENST00000442956 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 MAF1Q9H063 256 aa16.29■□□□□ 0.2
LINC00299-202ENST00000442956 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
LINC00299-202ENST00000442956 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
LINC00299-202ENST00000442956 TRIM49BA6NDI0 452 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 EHHADHQ08426 723 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 EPHA7Q15375 998 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 ARSHQ5FYA8 562 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 KCTD17Q8N5Z5 321 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
LINC00299-202ENST00000442956 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 PANK4Q9NVE7 773 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 LOC285556D6RIA3 1793 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
LINC00299-202ENST00000442956 PPP1R2P41236 205 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
LINC00299-202ENST00000442956 COBLL1Q53SF7 1204 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms