RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 INPP4AQ96PE3 977 aaPredicted RBP15.94■□□□□ 0.14
PTPRE-203ENST00000442830 SENP7Q9BQF6 1050 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 C16orf70Q9BSU1 422 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 SPZ1Q9BXG8 430 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 CERS4Q9HA82 394 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 SEC63Q9UGP8 760 aaKnown RBP15.94■□□□□ 0.14
PTPRE-203ENST00000442830 XIRP2A4UGR9 3374 aa15.94■□□□□ 0.14
PTPRE-203ENST00000442830 COL4A6Q14031 1691 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 E7EWF7 191 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 LGALS2P05162 132 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 RPLP2P05387 115 aaKnown RBP15.93■□□□□ 0.14
PTPRE-203ENST00000442830 GSPT1P15170 499 aaKnown RBP15.93■□□□□ 0.14
PTPRE-203ENST00000442830 THPOP40225 353 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 DEFB103AP81534 67 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 SEPT8Q92599 483 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 APBB2Q92870 758 aa15.93■□□□□ 0.14
PTPRE-203ENST00000442830 EPOPA6NHQ4 379 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 RFXAPO00287 272 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 PIK3CDO00329 1044 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 SGSM2O43147 1006 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 CALM1P0DP23 149 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 CALM2P0DP24 149 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 CALM3P0DP25 149 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 COL9A1P20849 921 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 PLEKHG4Q58EX7 1191 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 PCNX4Q63HM2 1172 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 TRAF7Q6Q0C0 670 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 NLRX1Q86UT6 975 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 TEX2Q8IWB9 1127 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 IL31RAQ8NI17 732 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
PTPRE-203ENST00000442830 IL25Q9H293 177 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 RALGAPA2Q2PPJ7 1873 aa15.92■□□□□ 0.14
PTPRE-203ENST00000442830 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 SPATA31C2B4DYI2 1134 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 CYTH3O43739 400 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 SMIM10L2AP0DMW4 78 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 SMIM10L2BP0DMW5 78 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 SP2Q02086 613 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 TFF2Q03403 129 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 PTPROQ16827 1216 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 TMEM87BQ96K49 555 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
PTPRE-203ENST00000442830 LINC01553A4QN01 128 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 LPXNO60711 386 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 ARHGEF15O94989 841 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 PDE4AP27815 886 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 HTRA4P83105 476 aaPredicted RBP15.9■□□□□ 0.14
PTPRE-203ENST00000442830 PTH1RQ03431 593 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
PTPRE-203ENST00000442830 ZNF654Q8IZM8 581 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 MYOCDQ8IZQ8 938 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 FBXO22Q8NEZ5 403 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 GDPD5Q8WTR4 605 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 MAP4K1Q92918 833 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 TNPO1Q92973 898 aaKnown RBP15.9■□□□□ 0.14
PTPRE-203ENST00000442830 EHMT1Q9H9B1 1298 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 NRCAMQ92823 1304 aa15.9■□□□□ 0.14
PTPRE-203ENST00000442830 LCHNA4D1U4 455 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 MCM5P33992 734 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 KCNQ1P51787 676 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
PTPRE-203ENST00000442830 ZNF200P98182 395 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-203ENST00000442830 MBTPS1Q14703 1052 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 TAF2Q6P1X5 1199 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 CYFIP1Q7L576 1253 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 RSPH3Q86UC2 560 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 DBF4BQ8NFT6 615 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 SP7Q8TDD2 431 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-203ENST00000442830 GPRASP2Q96D09 838 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 GPR20Q99678 358 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 RNPEPQ9H4A4 650 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
PTPRE-203ENST00000442830 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 MAFGO15525 162 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
PTPRE-203ENST00000442830 SLC35G1Q2M3R5 365 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
PTPRE-203ENST00000442830 TIGD5Q53EQ6 642 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 FAM26DQ5JW98 314 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 NFXL1Q6ZNB6 911 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 FAM43BQ6ZT52 329 aaPredicted RBP15.88■□□□□ 0.13
PTPRE-203ENST00000442830 RPAINQ86UA6 219 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 WNT8BQ93098 351 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 YME1L1Q96TA2 773 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 LY9Q9HBG7 655 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 RWDD3Q9Y3V2 267 aa15.88■□□□□ 0.13
PTPRE-203ENST00000442830 RBM8AQ9Y5S9 174 aaKnown RBP15.88■□□□□ 0.13
PTPRE-203ENST00000442830 TREHO43280 583 aa15.87■□□□□ 0.13
PTPRE-203ENST00000442830 SORBS3O60504 671 aa15.87■□□□□ 0.13
PTPRE-203ENST00000442830 LIFRP42702 1097 aa15.87■□□□□ 0.13
PTPRE-203ENST00000442830 KRT40Q6A162 431 aa15.87■□□□□ 0.13
PTPRE-203ENST00000442830 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.13
PTPRE-203ENST00000442830 TOP1MTQ969P6 601 aa15.87■□□□□ 0.13
PTPRE-203ENST00000442830 MRPL38Q96DV4 380 aaKnown RBP15.87■□□□□ 0.13
PTPRE-203ENST00000442830 ARIH1Q9Y4X5 557 aaPredicted RBP15.87■□□□□ 0.13
PTPRE-203ENST00000442830 SPDYE3A6NKU9 549 aa15.86■□□□□ 0.13
PTPRE-203ENST00000442830 PRC1O43663 620 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms