RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ANKRD23Q86SG2 305 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 IFT20Q8IY31 132 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 ANKS1AQ92625 1134 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 CCT8L2Q96SF2 557 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 ANKIB1Q9P2G1 1089 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 PLAAQ9Y263 795 aa15.54■□□□□ 0.08
MCF2L-218ENST00000442625 SLC37A4O43826 429 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 ATP2C2O75185 946 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 SSBP05455 408 aaKnown RBP eCLIP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 TMOD1P28289 359 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 AMPD3Q01432 767 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 HLTFQ14527 1009 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■■□□ 15.3
MCF2L-218ENST00000442625 PTGISQ16647 500 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 EXOC8Q8IYI6 725 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 TBC1D5Q92609 795 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 LRRC4CQ9HCJ2 640 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 C6orf50Q9HD87 102 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 GDF3Q9NR23 364 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 LAMB1P07942 1786 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 TDP2O95551 362 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 POLR2FP61218 127 aaKnown RBP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 CACNB1Q02641 598 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-218ENST00000442625 SOGA3Q5TF21 947 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 EPN3Q9H201 632 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 MAGEF1Q9HAY2 307 aa15.53■□□□□ 0.08
MCF2L-218ENST00000442625 LCA5LO95447 670 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 ITIH3Q06033 890 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 PTF1AQ7RTS3 328 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 NLRP14Q86W24 1093 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 MYCBPAPQ8TBZ2 947 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 COA7Q96BR5 231 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 CEP89Q96ST8 783 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 EYA3Q99504 573 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 AP1M1Q9BXS5 423 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 ANKRD2Q9GZV1 360 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.08
MCF2L-218ENST00000442625 ADAMTS1Q9UHI8 967 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 LAMB2P55268 1798 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-218ENST00000442625 CASZ1Q86V15 1759 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 PPP1R37O75864 691 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 ACTN3Q08043 901 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-218ENST00000442625 KDM7AQ6ZMT4 941 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 CDK5RAP3Q96JB5 506 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
MCF2L-218ENST00000442625 A0A087X0T9 212 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 USP17L5A8MUK1 530 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 FAM228BP0C875 321 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 FLT3P36888 993 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.07
MCF2L-218ENST00000442625 CALCRLQ16602 461 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 SWT1Q5T5J6 900 aaKnown RBP15.52■□□□□ 0.07
MCF2L-218ENST00000442625 SPTY2D1Q68D10 685 aaPredicted RBP15.52■□□□□ 0.07
MCF2L-218ENST00000442625 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 REXO1Q8N1G1 1221 aaKnown RBP15.52■□□□□ 0.07
MCF2L-218ENST00000442625 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.07
MCF2L-218ENST00000442625 SPATA31A1Q5TZJ5 1347 aa15.52■□□□□ 0.07
MCF2L-218ENST00000442625 NOL4O94818 638 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 GNA11P29992 359 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 CDK8P49336 464 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 PAK2Q13177 524 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 RAPGEF1Q13905 1077 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
MCF2L-218ENST00000442625 QPCTQ16769 361 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 CCDC91Q7Z6B0 441 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 CEP95Q96GE4 821 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
MCF2L-218ENST00000442625 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 MDH1P40925 334 aaKnown RBP15.51■□□□□ 0.07
MCF2L-218ENST00000442625 EIF6P56537 245 aaKnown RBP15.51■□□□□ 0.07
MCF2L-218ENST00000442625 ERVK-9P63128 1117 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 NFIXQ14938 502 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 KIAA0753Q2KHM9 967 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 CABS1Q96KC9 395 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 ATP6V1G3Q96LB4 118 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 SPZ1Q9BXG8 430 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 NEUROG2Q9H2A3 272 aa15.51■□□□□ 0.07
MCF2L-218ENST00000442625 KCNK3O14649 394 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 PJA2O43164 708 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 MAP2K2P36507 400 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 ITGB3BPQ13352 177 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-218ENST00000442625 ECM1Q16610 540 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 UNC13DQ70J99 1090 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 CLEC10AQ8IUN9 316 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 DDX12PQ92771 950 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 TRAF5O00463 557 aa15.5■□□□□ 0.07
MCF2L-218ENST00000442625 BAG3O95817 575 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms