RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 FRMPD4Q14CM0 1322 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CCL15-CCL14A0A0B4J2E2 113 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SLC26A4O43511 780 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 BCRP11274 1271 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SARSP49591 514 aaKnown RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MAP2K1Q02750 393 aaPredicted RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 PGM5Q15124 567 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CCL15Q16663 113 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CST9Q5W186 159 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 HAUS3Q68CZ6 603 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ISM2Q6H9L7 571 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 XRRA1Q6P2D8 792 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 C11orf57Q6ZUT1 292 aaPredicted RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ANKRD35Q8N283 1001 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ERMNQ8TAM6 284 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 NSUN6Q8TEA1 469 aaKnown RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 GSDMAQ96QA5 445 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 KDM3AQ9Y4C1 1321 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SMCHD1A6NHR9 2005 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SLC25A27O95847 323 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MYL1P05976 194 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ZBTB48P10074 688 aaPredicted RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ITGB5P18084 799 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 COPB2P35606 906 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CCT6AP40227 531 aaKnown RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 HUNKP57058 714 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SPIRE1Q08AE8 756 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 DPYDQ12882 1025 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MKRN3Q13064 507 aaKnown RBP9.04□□□□□ -0.96
CCDC39-201ENST00000442201 GRB10Q13322 594 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 LRCH2Q5VUJ6 765 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 NCAPG2Q86XI2 1143 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SLC5A5Q92911 643 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MS4A4AQ96JQ5 239 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MTRQ99707 1265 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 ZNF577Q9BSK1 485 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 NT5C3AQ9H0P0 336 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 KBTBD4Q9NVX7 518 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MAN1B1Q9UKM7 699 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 UBIAD1Q9Y5Z9 338 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 RLFQ13129 1914 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 MYH7BA7E2Y1 1941 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 PFASO15067 1338 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 BECN2A8MW95 431 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 PEX10O60683 326 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 GAS7O60861 476 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 ARP10275 920 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 MRPS9P82933 396 aaKnown RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 AMPD3Q01432 767 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 NCAPH2Q6IBW4 605 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 LUZP1Q86V48 1076 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 GTF3C2Q8WUA4 911 aaPredicted RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 PNMA5Q96PV4 448 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 PURBQ96QR8 312 aaKnown RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 MOV10L1Q9BXT6 1211 aaKnown RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 WDR11Q9BZH6 1224 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 RBPJLQ9UBG7 517 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 RSPH14Q9UHP6 348 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 LOC285556D6RIA3 1793 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 GOLGA6L19H0YKK7 550 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 IPO5O00410 1097 aaKnown RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 PSMD10O75832 226 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 NR3C2P08235 984 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 CASP1P29466 404 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 CCND2P30279 289 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 SMCR8Q8TEV9 937 aaPredicted RBP9.03□□□□□ -0.96
CCDC39-201ENST00000442201 RIT2Q99578 217 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 BLZF1Q9H2G9 400 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 JADE2Q9NQC1 790 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 KCNH7Q9NS40 1196 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 SLC45A1Q9Y2W3 748 aa9.03□□□□□ -0.96
CCDC39-201ENST00000442201 CNMDO75829 334 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 CYP2C19P33261 490 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 MTMR1Q13613 665 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 CUL4BQ13620 913 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 MORC3Q14149 939 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 TMEM119Q4V9L6 283 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 HYIQ5T013 277 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 SV2BQ7L1I2 683 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 VSIG10LQ86VR7 867 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 MLKLQ8NB16 471 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 BRI3BPQ8WY22 251 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 LARP4BQ92615 738 aaKnown RBP9.02□□□□□ -0.96
CCDC39-201ENST00000442201 MED4Q9NPJ6 270 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 RMND1Q9NWS8 449 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 DACH1Q9UI36 760 aa9.02□□□□□ -0.96
CCDC39-201ENST00000442201 PTPRFP10586 1907 aa9.02□□□□□ -0.97
CCDC39-201ENST00000442201 PARP14Q460N5 1801 aa9.02□□□□□ -0.97
CCDC39-201ENST00000442201 BTBD19C9JJ37 291 aa9.02□□□□□ -0.97
CCDC39-201ENST00000442201 PDHXO00330 501 aa9.02□□□□□ -0.97
CCDC39-201ENST00000442201 ERCC3P19447 782 aa9.02□□□□□ -0.97
CCDC39-201ENST00000442201 IQCB1Q15051 598 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms