RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 TROAPQ12815 778 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 NPY5RQ15761 445 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 FAM114A1Q8IWE2 563 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 TLR10Q9BXR5 811 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 SAP30BPQ9UHR5 308 aaKnown RBP13.11□□□□□ -0.31
LTBR-203ENST00000441074 A0A1B0GUL6 1792 aa13.11□□□□□ -0.31
LTBR-203ENST00000441074 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 RHOBTB3O94955 611 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 PDHBP11177 359 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 DPEP1P16444 411 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 SLC8A1P32418 973 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 STAT6P42226 847 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 KIF11P52732 1056 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 GUCY2DQ02846 1103 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 PSMB7Q99436 277 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 SYT17Q9BSW7 474 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 ATP6V0A4Q9HBG4 840 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 DNM1LO00429 736 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 NCK2O43639 380 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 KLRC4O43908 158 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 MYL1P05976 194 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 IL1R1P14778 569 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 HSPA9P38646 679 aaKnown RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 SCNN1DP51172 638 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 MAPKAPK5Q8IW41 473 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 CERS5Q8N5B7 392 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 CEP120Q8N960 986 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.31
LTBR-203ENST00000441074 P3H4Q92791 437 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 OSBPL7Q9BZF2 842 aa13.1□□□□□ -0.31
LTBR-203ENST00000441074 ZC3H12CQ9C0D7 883 aaKnown RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 PPANQ9NQ55 473 aaKnown RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 TPX2Q9ULW0 747 aaKnown RBP13.1□□□□□ -0.31
LTBR-203ENST00000441074 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 CALML3P27482 149 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
LTBR-203ENST00000441074 GUCY2FP51841 1108 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 TGFB2P61812 414 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
LTBR-203ENST00000441074 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 PLCB1Q9NQ66 1216 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 PLAAQ9Y263 795 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
LTBR-203ENST00000441074 BICDL2A1A5D9 508 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 C5orf60A6NFR6 353 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 GOLGA6L10A6NI86 522 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 TRAPPC3O43617 180 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 SLURP2P0DP57 97 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 SCG2P13521 617 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 MAGEA1P43355 309 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.31
LTBR-203ENST00000441074 NT5C2P49902 561 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 XRCC4Q13426 336 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.31
LTBR-203ENST00000441074 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 CASKIN2Q8WXE0 1202 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.31
LTBR-203ENST00000441074 NOX5Q96PH1 765 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 NOC4LQ9BVI4 516 aaKnown RBP13.08□□□□□ -0.31
LTBR-203ENST00000441074 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.31
LTBR-203ENST00000441074 DISC1Q9NRI5 854 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 HAUS2Q9NVX0 235 aa13.08□□□□□ -0.31
LTBR-203ENST00000441074 hCG_1642624A0A1W2PR95 340 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 GRID2IPA4D2P6 1211 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 ORC4O43929 436 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 AKR1B10O60218 316 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 RTN2O75298 545 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 KCNA3P22001 575 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 CCNE1P24864 410 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 ALDH1B1P30837 517 aa13.08□□□□□ -0.32
LTBR-203ENST00000441074 MCM7P33993 719 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms