RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 H3BRB1 525 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 NBNO60934 754 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 CYFIP1Q7L576 1253 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 TCEANC2Q96MN5 208 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 GPR20Q99678 358 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 SENP7Q9BQF6 1050 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 COL25A1Q9BXS0 654 aaPredicted RBP19.34■□□□□ 0.69
COL16A1-204ENST00000440437 TUT1Q9H6E5 874 aaKnown RBP19.34■□□□□ 0.69
COL16A1-204ENST00000440437 PSTPIP2Q9H939 334 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 SIP14410 1827 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 KAT6AQ92794 2004 aa19.34■□□□□ 0.69
COL16A1-204ENST00000440437 NOP56O00567 594 aaKnown RBP19.33■□□□□ 0.68
COL16A1-204ENST00000440437 UBE2SQ16763 222 aa19.33■□□□□ 0.68
COL16A1-204ENST00000440437 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
COL16A1-204ENST00000440437 SERINC5Q86VE9 423 aa19.33■□□□□ 0.68
COL16A1-204ENST00000440437 USP26Q9BXU7 913 aa19.33■□□□□ 0.68
COL16A1-204ENST00000440437 RBM28Q9NW13 759 aaKnown RBP19.33■□□□□ 0.68
COL16A1-204ENST00000440437 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.68
COL16A1-204ENST00000440437 TELO2Q9Y4R8 837 aa19.33■□□□□ 0.68
COL16A1-204ENST00000440437 CA3P07451 260 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 SMIM10L2AP0DMW4 78 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 SMIM10L2BP0DMW5 78 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 WDR5P61964 334 aaKnown RBP19.32■□□□□ 0.68
COL16A1-204ENST00000440437 FUT2Q10981 343 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 MBTPS1Q14703 1052 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 TCTN1Q2MV58 587 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 ZNF618Q5T7W0 954 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 WWC2Q6AWC2 1192 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 CNKSR3Q6P9H4 555 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 SYNE3Q6ZMZ3 975 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 NLRX1Q86UT6 975 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 HERC6Q8IVU3 1022 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 GPRASP2Q96D09 838 aa19.32■□□□□ 0.68
COL16A1-204ENST00000440437 TRANK1O15050 2925 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 C17orf102A2RUQ5 167 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 KRT32Q14532 448 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 RTN1Q16799 776 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 TYW1BQ6NUM6 668 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 HEATR3Q7Z4Q2 680 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 TRIM50Q86XT4 487 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 KCNB2Q92953 911 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 UBIAD1Q9Y5Z9 338 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 CUL9Q8IWT3 2517 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 VCANP13611 3396 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 REV3LO60673 3130 aa19.31■□□□□ 0.68
COL16A1-204ENST00000440437 RBAK-RBAKDNI3L0D1 243 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 ZBTB43O43298 467 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 ARHGEF15O94989 841 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 KCNA2P16389 499 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 ITGB5P18084 799 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 ATP6V0A1Q93050 837 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 RNPEPQ9H4A4 650 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 PCDHA6Q9UN73 950 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 PCDHA8Q9Y5H6 950 aa19.3■□□□□ 0.68
COL16A1-204ENST00000440437 SPDYE3A6NKU9 549 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 TREHO43280 583 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 ATP9AO75110 1047 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 KCNJ6P48051 423 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 RCAN1P53805 252 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 DEFB103AP81534 67 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 PPP1R18Q6NYC8 613 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 GIMAP8Q8ND71 665 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-204ENST00000440437 CDHR1Q96JP9 859 aa19.29■□□□□ 0.68
COL16A1-204ENST00000440437 FAM217BQ9NTX9 383 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-204ENST00000440437 KLF18A0A0U1RQI7 1052 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 ABHD14A-ACY1A0A1B0GW23 586 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 GOLGA8BA8MQT2 603 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 hCG_1984214I3L0E3 225 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
COL16A1-204ENST00000440437 CDC27P30260 824 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 ADAM17P78536 824 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 SP4Q02446 784 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 TAP1Q03518 808 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 MKRN4PQ13434 485 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-204ENST00000440437 ZNF713Q8N859 430 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-204ENST00000440437 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
COL16A1-204ENST00000440437 ZNF215Q9UL58 517 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-204ENST00000440437 EMSYQ7Z589 1322 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 KIF28PB7ZC32 967 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 STXBP3O00186 592 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 LGR5O75473 907 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 IGFBP4P22692 258 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 HSPA4P34932 840 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 TCF7P36402 384 aaPredicted RBP19.27■□□□□ 0.68
COL16A1-204ENST00000440437 THPOP40225 353 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 NAPAP54920 295 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 MTMR1Q13613 665 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
COL16A1-204ENST00000440437 TMCO2Q7Z6W1 182 aaPredicted RBP19.27■□□□□ 0.68
COL16A1-204ENST00000440437 TEX2Q8IWB9 1127 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 RIC8AQ9NPQ8 531 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 JADE2Q9NQC1 790 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 SETD4Q9NVD3 440 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
COL16A1-204ENST00000440437 NID2Q14112 1375 aa19.27■□□□□ 0.68
COL16A1-204ENST00000440437 EPOPA6NHQ4 379 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 RSPH10B2B2RC85 870 aa19.26■□□□□ 0.67
COL16A1-204ENST00000440437 TLL1O43897 1013 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms