RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MAP3K20Q9NYL2 800 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ESYT2A0FGR8 921 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MYADML2A6NDP7 307 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ARIH2O95376 493 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 RARBP10826 455 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CCND2P30279 289 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MRPL12P52815 198 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZRSR1Q15695 479 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 UVSSAQ2YD98 709 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 IWS1Q96ST2 819 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 XPNPEP3Q9NQH7 507 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 FBXO2Q9UK22 296 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 PCDHA6Q9UN73 950 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 PCDHA8Q9Y5H6 950 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SYNRGQ9UMZ2 1314 aa16.44■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MSCO60682 206 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 RGS20O76081 388 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 FARP2O94887 1054 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZNF202O95125 648 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CLK2P49760 499 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZNF174Q15697 407 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 STXBP2Q15833 593 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 STX1AQ16623 288 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 COPS5Q92905 334 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CLIC6Q96NY7 704 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 WDR11Q9BZH6 1224 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SRPRBQ9Y5M8 271 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 KIAA1217Q5T5P2 1943 aa16.43■□□□□ 0.22
TNFRSF1A-204ENST00000440083 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 RBM47A0AV96 593 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SPDYE3A6NKU9 549 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 B4DLN1 442 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SORBS3O60504 671 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 NONOQ15233 471 aaKnown RBP eCLIP16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 UBE2Q1Q7Z7E8 422 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 REXO1Q8N1G1 1221 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ANO3Q9BYT9 981 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 HPSEQ9Y251 543 aa16.42■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ADAMTS4O75173 837 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 DUSP11O75319 330 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CAVIN2O95810 425 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MCM7P33993 719 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ATP2C1P98194 919 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 BEX3Q00994 111 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 LRRC41Q15345 812 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 LY6KQ17RY6 165 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 PAWRQ96IZ0 340 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 KCNH3Q9ULD8 1083 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 GNEQ9Y223 722 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
TNFRSF1A-204ENST00000440083 M0R2N6 131 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 SEMA3FQ13275 785 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ANO6Q4KMQ2 910 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 IQSEC1Q6DN90 963 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 TLK2Q86UE8 772 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 FAM200AQ8TCP9 573 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ANO10Q9NW15 660 aa16.4■□□□□ 0.22
TNFRSF1A-204ENST00000440083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 PTGDRQ13258 359 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 AP3B2Q13367 1082 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 INF2Q27J81 1249 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 CNNM3Q8NE01 707 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DDX41Q9UJV9 622 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
TNFRSF1A-204ENST00000440083 DNM1LO00429 736 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ITGB5P18084 799 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SREBF1P36956 1147 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TXLNAP40222 546 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 RGS19P49795 217 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 GJA9P57773 515 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 SP2Q02086 613 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ORC2Q13416 577 aaPredicted RBP16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 TTLL4Q14679 1199 aa16.38■□□□□ 0.21
TNFRSF1A-204ENST00000440083 ARL6IP4Q66PJ3 421 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms