RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 HDAC6Q9UBN7 1215 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 AGTPBP1Q9UPW5 1226 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 NEDD4P46934 1319 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 KIF20BQ96Q89 1820 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC169A6NNP5 214 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 DDAH1O94760 285 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 HEXIM1O94992 359 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 HSPA6P17066 643 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 PHBP35232 272 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 TPD52P55327 224 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 ITIH3Q06033 890 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 NCAPHQ15003 741 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC92Q53HC0 331 aaPredicted RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 GSPT2Q8IYD1 628 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 DDX17Q92841 729 aaKnown RBP6.93□□□□□ -1.3
BDNF-211ENST00000439476 P2RX5Q93086 422 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 BAIAP2L1Q9UHR4 511 aa6.93□□□□□ -1.3
BDNF-211ENST00000439476 GOLGA8QA0A0J9YX86 632 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 GOLGA8OA6NCC3 632 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 TMEM110-MUSTN1A8MSY1 372 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 GOLGA8NF8WBI6 632 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 hCG_1984214I3L0E3 225 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 CYP11B2P19099 503 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 STAT1P42224 750 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 TECP42680 631 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 SCNN1BP51168 640 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 LMNB2Q03252 620 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 NNTQ13423 1086 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 CUL4BQ13620 913 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 SCARF1Q14162 830 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 HERC4Q5GLZ8 1057 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 CCDC117Q8IWD4 279 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 NELFCDQ8IXH7 590 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 REXO1Q8N1G1 1221 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 LCORLQ8N3X6 602 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 ZNF713Q8N859 430 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 MORC4Q8TE76 937 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 DHRS1Q96LJ7 313 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 KRT12Q99456 494 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 LARSQ9P2J5 1176 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 FBXO2Q9UK22 296 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 PCDHB13Q9Y5F0 798 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 UTYO14607 1347 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 PRPF3O43395 683 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 MOCS3O95396 460 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 FAM200BP0CF97 657 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 P4HA1P13674 534 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 PSMC4P43686 418 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 FOXO4P98177 505 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 EHHADHQ08426 723 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 BIRC3Q13489 604 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 CALCRLQ16602 461 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 ANKRD20A3Q5VUR7 823 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 ALS2CLQ60I27 953 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 RASGRP2Q7LDG7 609 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 SUPT20HQ8NEM7 779 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 COG1Q8WTW3 980 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 CCT6BQ92526 530 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 VCX3AQ9NNX9 186 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 ASIC3Q9UHC3 531 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 OR52Z1P0C646 297 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 RFX5P48382 616 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
BDNF-211ENST00000439476 ANTXR2P58335 489 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 AOC3Q16853 763 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 BRDTQ58F21 947 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 GKAP1Q5VSY0 366 aaPredicted RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 FAAH2Q6GMR7 532 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 SGMS1Q86VZ5 419 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 WDR75Q8IWA0 830 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 RBM12BQ8IXT5 1001 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 RNF10Q8N5U6 811 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 NEK9Q8TD19 979 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 RASGRP4Q8TDF6 673 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 HAUS1Q96CS2 278 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 AK8Q96MA6 479 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 LSM14BQ9BX40 385 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 THAP9Q9H5L6 903 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 MKS1Q9NXB0 559 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 THRAP3Q9Y2W1 955 aaKnown RBP6.92□□□□□ -1.3
BDNF-211ENST00000439476 CEMIPQ8WUJ3 1361 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 PTPRUQ92729 1446 aa6.92□□□□□ -1.3
BDNF-211ENST00000439476 LGALS16A8MUM7 142 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 GIPC1O14908 333 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 HNRNPH1P31943 449 aaKnown RBP6.91□□□□□ -1.3
BDNF-211ENST00000439476 MAGEA10P43363 369 aaPredicted RBP6.91□□□□□ -1.3
BDNF-211ENST00000439476 PDCLQ13371 301 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 PTPROQ16827 1216 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 EMBQ6PCB8 327 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 SLFN12Q8IYM2 578 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 HNRNPLLQ8WVV9 542 aaKnown RBP6.91□□□□□ -1.3
BDNF-211ENST00000439476 ADD3Q9UEY8 706 aaKnown RBP6.91□□□□□ -1.3
BDNF-211ENST00000439476 HEG1Q9ULI3 1381 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 TRIM49BA6NDI0 452 aa6.91□□□□□ -1.3
BDNF-211ENST00000439476 SMCO2A6NFE2 343 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms