RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 GH1P01241 217 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 CHGBP05060 677 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 BMPR1AP36894 532 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
CSTF3-203ENST00000438862 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
CSTF3-203ENST00000438862 MYO15AQ9UKN7 3530 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 UPP2O95045 317 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 ARIH2O95376 493 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 GNAT2P19087 354 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 CTNNB1P35222 781 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 NBL1P41271 181 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 TFAP4Q01664 338 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 THSD4Q6ZMP0 1018 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 SEPT8Q92599 483 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
CSTF3-203ENST00000438862 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
CSTF3-203ENST00000438862 HAS3O00219 553 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 GRM6O15303 877 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
CSTF3-203ENST00000438862 TDO2P48775 406 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 NDUFV1P49821 464 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 RPS6P62753 249 aaKnown RBP13.14□□□□□ -0.31
CSTF3-203ENST00000438862 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 COASYQ13057 564 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 MFSD10Q14728 455 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 IFIH1Q9BYX4 1025 aaKnown RBP13.14□□□□□ -0.31
CSTF3-203ENST00000438862 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
CSTF3-203ENST00000438862 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 LINC01565O15544 149 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 APPP05067 770 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 ICAM3P32942 547 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 THPOP40225 353 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
CSTF3-203ENST00000438862 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 KIAA0753Q2KHM9 967 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CSTF3-203ENST00000438862 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 WNT8BQ93098 351 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
CSTF3-203ENST00000438862 PHF7Q9BWX1 381 aaPredicted RBP13.13□□□□□ -0.31
CSTF3-203ENST00000438862 PLVAPQ9BX97 442 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 MAF1Q9H063 256 aa13.13□□□□□ -0.31
CSTF3-203ENST00000438862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 PATL2C9JE40 543 aaKnown RBP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 RAB11FIP3O75154 756 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 KDM4AO75164 1064 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 F2P00734 622 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 MMP1P03956 469 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 APBB2Q92870 758 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 NKD2Q969F2 451 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
CSTF3-203ENST00000438862 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
CSTF3-203ENST00000438862 CAND2O75155 1236 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 ZNF200P98182 395 aaPredicted RBP13.11□□□□□ -0.31
CSTF3-203ENST00000438862 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 CCDC96Q2M329 555 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 SEPT14Q6ZU15 432 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 IFNL3Q8IZI9 196 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 EFHBQ8N7U6 833 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 APPBP2Q92624 585 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 CLP1Q92989 425 aaKnown RBP13.11□□□□□ -0.31
CSTF3-203ENST00000438862 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CSTF3-203ENST00000438862 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
CSTF3-203ENST00000438862 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
CSTF3-203ENST00000438862 KIAA1217Q5T5P2 1943 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 PPFIA4O75335 1185 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 LINC00271P0C7V0 271 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
CSTF3-203ENST00000438862 SLC16A2P36021 539 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 STXBP2Q15833 593 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 NAALADL2Q58DX5 795 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
CSTF3-203ENST00000438862 P2RX5Q93086 422 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms