RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CC2D1AQ6P1N0 951 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CASC1Q6TDU7 716 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 ERMP1Q7Z2K6 904 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 SAPCD2Q86UD0 394 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CARFQ8N187 725 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 CCDC89Q8N998 374 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 TMEM52Q8NDY8 209 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 ALG3Q92685 438 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 LRRC27Q9C0I9 530 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 NOL7Q9UMY1 257 aaKnown RBP4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 USP31Q70CQ4 1352 aa4.47□□□□□ -1.69
HMGB1P12-201ENST00000438594 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.69
HMGB1P12-201ENST00000438594 FAM86C2PA6NEL3 165 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ALG1L2C9J202 215 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 OVOL3O00110 214 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ITGB3P05106 788 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 MYL3P08590 195 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 NCAM1P13591 858 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 RRM1P23921 792 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 PMLP29590 882 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 CNGA1P29973 690 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 HMGA2P52926 109 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ALFQ53S48 1182 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 CCDC70Q6NSX1 233 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 HDGFL2Q7Z4V5 671 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 CHST13Q8NET6 341 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ERP27Q96DN0 273 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 C8orf49Q96NF6 230 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 CCDC113Q9H0I3 377 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 BCAS3Q9H6U6 928 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 COPRSQ9NQ92 184 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZIM2Q9NZV7 527 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 ASAP1Q9ULH1 1129 aa4.46□□□□□ -1.7
HMGB1P12-201ENST00000438594 AKAP10O43572 662 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 NOBOXO60393 691 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 RAPGEF3O95398 923 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 SCP2P22307 547 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 CASP2P42575 452 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 ALDH1L2Q3SY69 923 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 CPZQ66K79 652 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 FAM196AQ6ZSG2 479 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 NLRC3Q7RTR2 1065 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 THNSL2Q86YJ6 484 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 SUGP1Q8IWZ8 645 aaKnown RBP4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 ATL2Q8NHH9 583 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 ATG4CQ96DT6 458 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 SLC6A18Q96N87 628 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 RSRP1Q9BUV0 290 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 RXFP1Q9HBX9 757 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 NGRNQ9NPE2 291 aaKnown RBP4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 CLIC5Q9NZA1 410 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 LUZP4Q9P127 313 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 POLG2Q9UHN1 485 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 SLC45A1Q9Y2W3 748 aa4.45□□□□□ -1.7
HMGB1P12-201ENST00000438594 SH3D21A4FU49 640 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 PRSS47A8MTI9 375 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 PRRT4C9JH25 899 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 GOLIM4O00461 696 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 SRGAP3O43295 1099 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 TCEA3O75764 348 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 RASGRP1O95267 797 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 F2P00734 622 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 GSNP06396 782 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 ASGR2P07307 311 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 RBP3P10745 1247 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 C6P13671 934 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZNF20P17024 532 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 FBLN1P23142 703 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 MCM4P33991 863 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 STAT3P40763 770 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 GDF5P43026 501 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 SARSP49591 514 aaKnown RBP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 AUHQ13825 339 aaKnown RBP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 RTP2Q5QGT7 225 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CDCP2Q5VXM1 449 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 SLC4A10Q6U841 1118 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 GK5Q6ZS86 529 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 TTLL7Q6ZT98 887 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 DDX46Q7L014 1031 aaKnown RBP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 KRT77Q7Z794 578 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 TMEM192Q8IY95 271 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CCDC144CPQ8IYA2 1237 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CELF2-AS1Q8N7Q2 184 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 FBXO41Q8TF61 875 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 SNRNP27Q8WVK2 155 aaKnown RBP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 ZNF622Q969S3 477 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 RNF38Q9H0F5 515 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 ALDH8A1Q9H2A2 487 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CNNM2Q9H8M5 875 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 PDLIM7Q9NR12 457 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 PRKAG3Q9UGI9 489 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 EFR3BQ9Y2G0 817 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 DAAM1Q9Y4D1 1078 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CD2APQ9Y5K6 639 aa4.44□□□□□ -1.7
HMGB1P12-201ENST00000438594 CLGNO14967 610 aa4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 PRPF3O43395 683 aaKnown RBP4.43□□□□□ -1.7
HMGB1P12-201ENST00000438594 IFIT2P09913 472 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms