RNA–Protein interactions for RNA: ENST00000437806.1

NCDN-205, Transcript of neurochondrin, humanhuman

TSL 2

Gene NCDN, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-205ENST00000437806 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
NCDN-205ENST00000437806 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
NCDN-205ENST00000437806 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 HLA-CQ95604 372 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 SENP7Q9BQF6 1050 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 SEC63Q9UGP8 760 aaKnown RBP16.53■□□□□ 0.24
NCDN-205ENST00000437806 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
NCDN-205ENST00000437806 INSL6Q9Y581 213 aa16.53■□□□□ 0.24
NCDN-205ENST00000437806 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
NCDN-205ENST00000437806 LCHNA4D1U4 455 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 PIK3CDO00329 1044 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 ERVK-21P61565 698 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
NCDN-205ENST00000437806 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.24
NCDN-205ENST00000437806 TFF2Q03403 129 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 MBTPS1Q14703 1052 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 PCNX4Q63HM2 1172 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
NCDN-205ENST00000437806 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 WNT8BQ93098 351 aa16.52■□□□□ 0.24
NCDN-205ENST00000437806 SORBS3O60504 671 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 LPXNO60711 386 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 NEFLP07196 543 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 CALM1P0DP23 149 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 CALM2P0DP24 149 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 CALM3P0DP25 149 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 ANTXR2P58335 489 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 CYFIP1Q7L576 1253 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 NLRX1Q86UT6 975 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
NCDN-205ENST00000437806 CDHR1Q96JP9 859 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 TMEM87BQ96K49 555 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 GPR20Q99678 358 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
NCDN-205ENST00000437806 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
NCDN-205ENST00000437806 LINC01553A4QN01 128 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 MCM5P33992 734 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
NCDN-205ENST00000437806 HIC1Q14526 733 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
NCDN-205ENST00000437806 DBF4BQ8NFT6 615 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 SEPT8Q92599 483 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 APBB2Q92870 758 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 RNPEPQ9H4A4 650 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 TAF6LQ9Y6J9 622 aa16.5■□□□□ 0.23
NCDN-205ENST00000437806 BDP1A6H8Y1 2624 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 TREHO43280 583 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 KCNQ1P51787 676 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
NCDN-205ENST00000437806 KRT40Q6A162 431 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
NCDN-205ENST00000437806 C1QTNF1Q9BXJ1 281 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 RTEL1Q9NZ71 1219 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 SIP14410 1827 aa16.49■□□□□ 0.23
NCDN-205ENST00000437806 NRCAMQ92823 1304 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 MEIS2O14770 477 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 PRC1O43663 620 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 COL9A1P20849 921 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 LIFRP42702 1097 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 SEMA3FQ13275 785 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.48■□□□□ 0.23
NCDN-205ENST00000437806 TEX2Q8IWB9 1127 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 MYOCDQ8IZQ8 938 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
NCDN-205ENST00000437806 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 GPRASP2Q96D09 838 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 COL4A6Q14031 1691 aa16.48■□□□□ 0.23
NCDN-205ENST00000437806 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
NCDN-205ENST00000437806 MAFGO15525 162 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 RPLP2P05387 115 aaKnown RBP16.47■□□□□ 0.23
NCDN-205ENST00000437806 FAM26DQ5JW98 314 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 SPRED2Q7Z698 418 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 RPAINQ86UA6 219 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 MYL10Q9BUA6 226 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 SETD4Q9NVD3 440 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 MTUS1Q9ULD2 1270 aa16.47■□□□□ 0.23
NCDN-205ENST00000437806 MICAL3Q7RTP6 2002 aa16.46■□□□□ 0.23
NCDN-205ENST00000437806 SH2B2O14492 632 aaPredicted RBP16.46■□□□□ 0.23
NCDN-205ENST00000437806 ADAM17P78536 824 aa16.46■□□□□ 0.23
NCDN-205ENST00000437806 PTPROQ16827 1216 aa16.46■□□□□ 0.23
NCDN-205ENST00000437806 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
NCDN-205ENST00000437806 TAF2Q6P1X5 1199 aa16.46■□□□□ 0.23
NCDN-205ENST00000437806 TOP1MTQ969P6 601 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms