RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 GOLGA8BA8MQT2 603 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 HSPA4P34932 840 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 NAPAP54920 295 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 SEMA3FQ13275 785 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 KCNB2Q92953 911 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 TCEANC2Q96MN5 208 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 GPR20Q99678 358 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 PCDHA6Q9UN73 950 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 PCDHA8Q9Y5H6 950 aa20.12■□□□□ 0.81
SBDSP1-203ENST00000437201 CNTNAP5Q8WYK1 1306 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 DLL1O00548 723 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 FOSP01100 380 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 PSMA5P28066 241 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 KCNJ6P48051 423 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 BLOC1S2Q6QNY1 142 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 DHX38Q92620 1227 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 ATP6V0A1Q93050 837 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 RIC8AQ9NPQ8 531 aa20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 V9GY48 417 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-203ENST00000437201 EMSYQ7Z589 1322 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 EFCAB14O75071 495 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 RABGGTBP53611 331 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 MTMR1Q13613 665 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 UBE2SQ16763 222 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 PPP2R2DQ66LE6 453 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 CNKSR3Q6P9H4 555 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 SERINC5Q86VE9 423 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 JAKMIP1Q96N16 626 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 YBX2Q9Y2T7 364 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 UBIAD1Q9Y5Z9 338 aa20.1■□□□□ 0.81
SBDSP1-203ENST00000437201 CXCL10P02778 98 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 SMIM10L2AP0DMW4 78 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 SMIM10L2BP0DMW5 78 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 ITGB5P18084 799 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 METAP2P50579 478 aaKnown RBP eCLIP20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 ADCY7P51828 1080 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 FUT2Q10981 343 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 Q6ZUG5 572 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 PRDM12Q9H4Q4 367 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 JADE2Q9NQC1 790 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 BARHL2Q9NY43 387 aa20.09■□□□□ 0.81
SBDSP1-203ENST00000437201 A0A0C4DFX4 3053 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 TANC1Q9C0D5 1861 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 ABHD14A-ACY1A0A1B0GW23 586 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 CAND2O75155 1236 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 HOXC8P31273 242 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 THPOP40225 353 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 IKBKEQ14164 716 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 TRIM71Q2Q1W2 868 aaKnown RBP20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 ZNF618Q5T7W0 954 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 UTP14CQ5TAP6 766 aaKnown RBP20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 FBXL16Q8N461 479 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 SEPT1Q8WYJ6 367 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 RNPEPQ9H4A4 650 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 SNX14Q9Y5W7 946 aa20.08■□□□□ 0.81
SBDSP1-203ENST00000437201 SMCO2A6NFE2 343 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 RSPH10B2B2RC85 870 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 NBNO60934 754 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 RSPH10BP0C881 870 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 KCNA2P16389 499 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 SP4Q02446 784 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 AP3B2Q13367 1082 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 HERC6Q8IVU3 1022 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 CCDC12Q8WUD4 166 aaPredicted RBP20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 BRF1Q92994 677 aa20.07■□□□□ 0.8
SBDSP1-203ENST00000437201 NRCAMQ92823 1304 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 STXBP3O00186 592 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 ATP9AO75110 1047 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 CDC27P30260 824 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 TCF7P36402 384 aaPredicted RBP20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 SCN5AQ14524 2016 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 GPNMBQ14956 572 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 MCTP2Q6DN12 878 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 MXRA8Q9BRK3 442 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 FAM217BQ9NTX9 383 aaPredicted RBP20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 ERAP1Q9NZ08 941 aa20.06■□□□□ 0.8
SBDSP1-203ENST00000437201 TREHO43280 583 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 CA3P07451 260 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 MYOGP15173 224 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 ADD1P35611 737 aaKnown RBP20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 WDR5P61964 334 aaKnown RBP20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 AKAP17AQ02040 695 aaKnown RBP20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 APOBRQ0VD83 1088 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 HIC1Q14526 733 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 PFKFB3Q16875 520 aaPredicted RBP20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 GLG1Q92896 1179 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 ZBED2Q9BTP6 218 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 SMARCAD1Q9H4L7 1026 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 SETD4Q9NVD3 440 aa20.05■□□□□ 0.8
SBDSP1-203ENST00000437201 TLL1O43897 1013 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms