RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 KLRC4O43908 158 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 FCER1AP12319 257 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 PAX7P23759 505 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 TMOD1P28289 359 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 TECP42680 631 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-202ENST00000437003 ANKRD40Q6AI12 368 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 CYB5D1Q6P9G0 228 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 ZNF572Q7Z3I7 529 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-202ENST00000437003 CASKIN2Q8WXE0 1202 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 MMRN2Q9H8L6 949 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 SLC24A3Q9HC58 644 aa13.62□□□□□ -0.23
TMEM116-202ENST00000437003 PACSIN2Q9UNF0 486 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-202ENST00000437003 DNM1LO00429 736 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 OPLAHO14841 1288 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
TMEM116-202ENST00000437003 ITGB3BPQ13352 177 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-202ENST00000437003 GRAPQ13588 217 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 HLTFQ14527 1009 aaKnown RBP eCLIP13.61□□□□□ -0.23
TMEM116-202ENST00000437003 QPCTQ16769 361 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 ZNF804AQ7Z570 1209 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 CABP7Q86V35 215 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-202ENST00000437003 RUBCNQ92622 972 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 TCP11L1Q9NUJ3 509 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 KLRF2D3W0D1 207 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 M0R2N6 131 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 STXBP3O00186 592 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 NEBLO76041 1014 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 FTCDO95954 541 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 STK4Q13043 487 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 CFAP221Q4G0U5 840 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 MIIPQ5JXC2 388 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 RRAGAQ7L523 313 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 RETREG2Q8NC44 543 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 PROCA1Q8NCQ7 364 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-202ENST00000437003 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
TMEM116-202ENST00000437003 GOLGA6L10A6NI86 522 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 LDHCP07864 332 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 PRLRP16471 622 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 NT5C2P49902 561 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 VPS72Q15906 364 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 KLHDC7AQ5VTJ3 777 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 KLHL7Q8IXQ5 586 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 FUKQ8N0W3 1084 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 GIMAP8Q8ND71 665 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 TPX2Q9ULW0 747 aaKnown RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 RHOBTB3O94955 611 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 SLC1A4P43007 532 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 CLNS1AP54105 237 aaKnown RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 PPP4CP60510 307 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 TRAPPC3LQ5T215 181 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 GALNT17Q6IS24 598 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 PAGR1Q9BTK6 254 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 CCDC189A1A4V9 331 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 PALM3A6NDB9 673 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 LRRC53A6NM62 1247 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 RASA1P20936 1047 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 TDRD12Q587J7 1177 aaKnown RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 C6orf89Q6UWU4 347 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 DNAJC14Q6Y2X3 702 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-202ENST00000437003 P2RX5Q93086 422 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 ZNF287Q9HBT7 754 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 SLC39A2Q9NP94 309 aa13.6□□□□□ -0.23
TMEM116-202ENST00000437003 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 PPP1R12BO60237 982 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-202ENST00000437003 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 TXKP42681 527 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 KCNB1Q14721 858 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 PTPROQ16827 1216 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
TMEM116-202ENST00000437003 ROBO3Q96MS0 1386 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 BIN2Q9UBW5 565 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-202ENST00000437003 HMGB1P1B2RPK0 211 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-202ENST00000437003 WLSQ5T9L3 541 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 DAGLBQ8NCG7 672 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 EYA3Q99504 573 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
TMEM116-202ENST00000437003 GMNCA6NCL1 334 aa13.58□□□□□ -0.24
TMEM116-202ENST00000437003 EZRP15311 586 aaKnown RBP13.58□□□□□ -0.24
TMEM116-202ENST00000437003 GCFC2P16383 781 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms