RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TMC6Q7Z403 805 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 KIAA0895Q8NCT3 520 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 TEX13BQ9BXU2 312 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 SLC39A2Q9NP94 309 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 KCNH7Q9NS40 1196 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 MAP3K20Q9NYL2 800 aaKnown RBP23.58■■□□□ 1.37
PTPRF-207ENST00000436724 PNMA2Q9UL42 364 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 SCN4AP35499 1836 aa23.58■■□□□ 1.37
PTPRF-207ENST00000436724 IQCA1LA6NCM1 817 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 IPO5O00410 1097 aaKnown RBP23.58■■□□□ 1.36
PTPRF-207ENST00000436724 SETQ01105 290 aaPredicted RBP23.58■■□□□ 1.36
PTPRF-207ENST00000436724 PGM5Q15124 567 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 CDKAL1Q5VV42 579 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 PCNX4Q63HM2 1172 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 UNC13DQ70J99 1090 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 ERO1BQ86YB8 467 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 CCDC47Q96A33 483 aaKnown RBP23.58■■□□□ 1.36
PTPRF-207ENST00000436724 DNAJC19Q96DA6 116 aa23.58■■□□□ 1.36
PTPRF-207ENST00000436724 NPHP3-ACAD11A0A0J9YXS1 232 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 MYCLP12524 364 aaPredicted RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 PPATQ06203 517 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 RAD51AP2Q09MP3 1159 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 TPD52L1Q16890 204 aaPredicted RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 CACTINQ8WUQ7 758 aaKnown RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 RABGAP1Q9Y3P9 1069 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 DDX39AO00148 427 aaKnown RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 RBM10P98175 930 aaKnown RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 CACNB1Q02641 598 aaPredicted RBP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 PABPC4Q13310 644 aaKnown RBP eCLIP23.57■■□□□ 1.36
PTPRF-207ENST00000436724 PPP2R5CQ13362 524 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 PXMP2Q9NR77 195 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 CLEC11AQ9Y240 323 aa23.57■■□□□ 1.36
PTPRF-207ENST00000436724 FRMPD4Q14CM0 1322 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 ATP2A1O14983 1001 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 CTTNQ14247 550 aaKnown RBP23.56■■□□□ 1.36
PTPRF-207ENST00000436724 TKFCQ3LXA3 575 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 GPBP1Q86WP2 473 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 PDCD2LQ9BRP1 358 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 UNC45AQ9H3U1 944 aa23.56■■□□□ 1.36
PTPRF-207ENST00000436724 A0A0G2JLL6 359 aaPredicted RBP23.55■■□□□ 1.36
PTPRF-207ENST00000436724 PVALEFA0A1B0GWK0 134 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 SPDYE5A6NIY4 337 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 TRAF5O00463 557 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 DYNC1I1O14576 645 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 SLC12A3P55017 1021 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 SEMA3FQ13275 785 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 ARHGEF16Q5VV41 709 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 MAP1SQ66K74 1059 aaPredicted RBP23.55■■□□□ 1.36
PTPRF-207ENST00000436724 CNNM4Q6P4Q7 775 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 APTXQ7Z2E3 356 aaKnown RBP23.55■■□□□ 1.36
PTPRF-207ENST00000436724 PRRT2Q7Z6L0 340 aaPredicted RBP23.55■■□□□ 1.36
PTPRF-207ENST00000436724 GLIS3Q8NEA6 775 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 HSD17B14Q9BPX1 270 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 UBIAD1Q9Y5Z9 338 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 PSMA7O14818 248 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 CBFA2T2O43439 604 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 CYP11B2P19099 503 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 STIM1Q13586 685 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 SAMD3Q8N6K7 520 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 DYDC2Q96IM9 177 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 LRRC27Q9C0I9 530 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 DNM3Q9UQ16 869 aa23.55■■□□□ 1.36
PTPRF-207ENST00000436724 MYPNQ86TC9 1320 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 SLC26A4O43511 780 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 SLITRK3O94933 977 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 ARSHQ5FYA8 562 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 PNMA8AQ86V59 439 aaPredicted RBP23.54■■□□□ 1.36
PTPRF-207ENST00000436724 OPTNQ96CV9 577 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 EEF2KMTQ96G04 330 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 POLR3CQ9BUI4 534 aaPredicted RBP23.54■■□□□ 1.36
PTPRF-207ENST00000436724 ZNF408Q9H9D4 720 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 A1CFQ9NQ94 594 aaKnown RBP23.54■■□□□ 1.36
PTPRF-207ENST00000436724 BCRP11274 1271 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 MTMR1Q13613 665 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 TPH2Q8IWU9 490 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 MYRIPQ8NFW9 859 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 TEKT3Q9BXF9 490 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 BTBD7Q9P203 1132 aa23.54■■□□□ 1.36
PTPRF-207ENST00000436724 ZBTB39O15060 712 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 EHHADHQ08426 723 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 ITGB3BPQ13352 177 aaPredicted RBP23.53■■□□□ 1.36
PTPRF-207ENST00000436724 B3GNT9Q6UX72 402 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 CREBRFQ8IUR6 639 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 LRRC8AQ8IWT6 810 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 PIGOQ8TEQ8 1089 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 ACAD9Q9H845 621 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 JADE2Q9NQC1 790 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 CYP39A1Q9NYL5 469 aa23.53■■□□□ 1.36
PTPRF-207ENST00000436724 COASYQ13057 564 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 TTI2Q6NXR4 508 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 LBX2Q6XYB7 198 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 PRIMPOLQ96LW4 560 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 BHMT2Q9H2M3 363 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 AGO4Q9HCK5 861 aaKnown RBP23.52■■□□□ 1.36
PTPRF-207ENST00000436724 BMP2KQ9NSY1 1161 aaPredicted RBP23.52■■□□□ 1.36
PTPRF-207ENST00000436724 PANK4Q9NVE7 773 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 WRAP73Q9P2S5 460 aaPredicted RBP23.52■■□□□ 1.36
PTPRF-207ENST00000436724 LOC285556D6RIA3 1793 aa23.52■■□□□ 1.36
PTPRF-207ENST00000436724 DHX15O43143 795 aaKnown RBP23.52■■□□□ 1.36
PTPRF-207ENST00000436724 LRRC41Q15345 812 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms