RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 IGFLR1Q9H665 355 aa17.54■□□□□ 0.4
NELFE-204ENST00000436289 TOMM22Q9NS69 142 aa17.54■□□□□ 0.4
NELFE-204ENST00000436289 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
NELFE-204ENST00000436289 MRPL11Q9Y3B7 192 aaKnown RBP17.54■□□□□ 0.4
NELFE-204ENST00000436289 C5orf42Q9H799 3197 aa17.54■□□□□ 0.4
NELFE-204ENST00000436289 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 H3BRB1 525 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 TBX10O75333 385 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 AVPR2P30518 371 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 NT5C2P49902 561 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 CELF3Q5SZQ8 465 aaKnown RBP17.53■□□□□ 0.4
NELFE-204ENST00000436289 P2RX5Q93086 422 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
NELFE-204ENST00000436289 TUT1Q9H6E5 874 aaKnown RBP17.53■□□□□ 0.4
NELFE-204ENST00000436289 FSD2A1L4K1 749 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 HIC1Q14526 733 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 FAM26DQ5JW98 314 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 SAMD3Q8N6K7 520 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 EFHBQ8N7U6 833 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 SMRP1Q8NCR6 262 aa17.52■□□□□ 0.4
NELFE-204ENST00000436289 ADGRA3Q8IWK6 1321 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 KIAA1217Q5T5P2 1943 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 LINC00271P0C7V0 271 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 PHF7Q9BWX1 381 aaPredicted RBP17.51■□□□□ 0.39
NELFE-204ENST00000436289 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 PXMP2Q9NR77 195 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 COL20A1Q9P218 1284 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 PLAGL2Q9UPG8 496 aa17.51■□□□□ 0.39
NELFE-204ENST00000436289 TREHO43280 583 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 SMIM10L2AP0DMW4 78 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 SMIM10L2BP0DMW5 78 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 ATF7P17544 494 aaPredicted RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 EIF2AK2P19525 551 aaKnown RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 ICAM3P32942 547 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 BTG3Q14201 252 aaPredicted RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 CDC37Q16543 378 aaPredicted RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 CCDC178Q5BJE1 867 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 RRP12Q5JTH9 1297 aaKnown RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 RNPEPQ9H4A4 650 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 MLXIPQ9HAP2 919 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 ALG13Q9NP73 1137 aaKnown RBP17.5■□□□□ 0.39
NELFE-204ENST00000436289 NLRC5Q86WI3 1866 aa17.5■□□□□ 0.39
NELFE-204ENST00000436289 FAM186AA6NE01 2351 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 FOXP2O15409 715 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 GGPS1O95749 300 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 ZNF689Q96CS4 500 aaPredicted RBP17.49■□□□□ 0.39
NELFE-204ENST00000436289 ASIC4Q96FT7 647 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 CLEC1BQ9P126 229 aa17.49■□□□□ 0.39
NELFE-204ENST00000436289 LINC01565O15544 149 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 GTF2F1P35269 517 aaKnown RBP eCLIP17.48■□□□□ 0.39
NELFE-204ENST00000436289 GHRHRQ02643 423 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 RC3H2Q9HBD1 1191 aaKnown RBP17.48■□□□□ 0.39
NELFE-204ENST00000436289 FAM86C1Q9NVL1 165 aa17.48■□□□□ 0.39
NELFE-204ENST00000436289 ENPP3O14638 875 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 CTSHP09668 335 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 HSD17B4P51659 736 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 CAMK1Q14012 370 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 MFSD6Q6ZSS7 791 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
NELFE-204ENST00000436289 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 ADGRF4Q8IZF3 695 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 RNF41Q9H4P4 317 aaPredicted RBP17.47■□□□□ 0.39
NELFE-204ENST00000436289 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
NELFE-204ENST00000436289 NOP56O00567 594 aaKnown RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 GALR2O43603 387 aaPredicted RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 DGKIO75912 1065 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 RGS20O76081 388 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 CFBP00751 764 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 FGAP02671 866 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 LGALS2P05162 132 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 RPLP2P05387 115 aaKnown RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 GOLGA8HP0CJ92 632 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 VCPP55072 806 aaKnown RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 TRAF1Q13077 416 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 PTPN21Q16825 1174 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 ASPRV1Q53RT3 343 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 SPPL3Q8TCT6 385 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 USP15Q9Y4E8 981 aaPredicted RBP17.46■□□□□ 0.39
NELFE-204ENST00000436289 MYH7BA7E2Y1 1941 aa17.46■□□□□ 0.39
NELFE-204ENST00000436289 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
NELFE-204ENST00000436289 NRCAMQ92823 1304 aa17.46■□□□□ 0.38
NELFE-204ENST00000436289 H0Y858 1186 aa17.45■□□□□ 0.38
NELFE-204ENST00000436289 MYCLP12524 364 aaPredicted RBP17.45■□□□□ 0.38
NELFE-204ENST00000436289 UBA1P22314 1058 aaKnown RBP17.45■□□□□ 0.38
NELFE-204ENST00000436289 NBL1P41271 181 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms