RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 MEIS1O00470 390 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 SORBS3O60504 671 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 GNA11P29992 359 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 HOXC8P31273 242 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 MTMR1Q13613 665 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 TMEM240Q5SV17 173 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 CYP2W1Q8TAV3 490 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 PGBD1Q96JS3 809 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.14
EXT1-202ENST00000436216 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 IL23AQ9NPF7 189 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 SH3GLB2Q9NR46 395 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 TELO2Q9Y4R8 837 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 CDH23Q9H251 3354 aa14.17□□□□□ -0.14
EXT1-202ENST00000436216 H3BRB1 525 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 NOP56O00567 594 aaKnown RBP14.16□□□□□ -0.14
EXT1-202ENST00000436216 PPFIA3O75145 1194 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 LGALS2P05162 132 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 CYP3A4P08684 503 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 CCL23P55773 120 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
EXT1-202ENST00000436216 RBL2Q08999 1139 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 ANKRD1Q15327 319 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 PTGISQ16647 500 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 CEP55Q53EZ4 464 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 NIPA1Q7RTP0 329 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 FAM177A1Q8N128 213 aaPredicted RBP14.16□□□□□ -0.14
EXT1-202ENST00000436216 C7orf31Q8N865 590 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
EXT1-202ENST00000436216 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 TPCN1Q9ULQ1 816 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 DOCK5Q9H7D0 1870 aa14.16□□□□□ -0.14
EXT1-202ENST00000436216 CPLX1O14810 134 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 PFKFB2O60825 505 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 DEXIO95424 95 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 SMAD3P84022 425 aaKnown RBP14.15□□□□□ -0.14
EXT1-202ENST00000436216 ARHGAP4P98171 946 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 SCRN1Q12765 414 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 STK3Q13188 491 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 HIC1Q14526 733 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 C8orf34Q49A92 452 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 JAKMIP3Q5VZ66 844 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 FAM109BQ6ICB4 259 aaPredicted RBP14.15□□□□□ -0.14
EXT1-202ENST00000436216 CPLX2Q6PUV4 134 aaKnown RBP14.15□□□□□ -0.14
EXT1-202ENST00000436216 ZNF365Q70YC5 407 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 REXO1Q8N1G1 1221 aaKnown RBP14.15□□□□□ -0.14
EXT1-202ENST00000436216 CCDC148Q8NFR7 591 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 CAGE1Q8TC20 777 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 RNPC3Q96LT9 517 aaKnown RBP14.15□□□□□ -0.14
EXT1-202ENST00000436216 ALG1Q9BT22 464 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 VPS54Q9P1Q0 977 aa14.15□□□□□ -0.14
EXT1-202ENST00000436216 NFASCO94856 1347 aa14.15□□□□□ -0.15
EXT1-202ENST00000436216 COL6A3P12111 3177 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 IGLV3-22A0A075B6J6 115 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 GSTTP1A0A1W2PQM5 241 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 EDIL3O43854 480 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 PFKMP08237 780 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 IQCF3P0C7M6 154 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 ARP10275 920 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 ACRP10323 421 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 AK2P54819 239 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 CHMP4BP1P59074 171 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 PTK7Q13308 1070 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 BFSP2Q13515 415 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 PSRC1Q6PGN9 363 aaPredicted RBP14.14□□□□□ -0.15
EXT1-202ENST00000436216 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
EXT1-202ENST00000436216 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 HERVK_113Q902F9 699 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 DHX38Q92620 1227 aaKnown RBP14.14□□□□□ -0.15
EXT1-202ENST00000436216 SCLYQ96I15 445 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
EXT1-202ENST00000436216 NOD1Q9Y239 953 aa14.14□□□□□ -0.15
EXT1-202ENST00000436216 FAM86B1E9PN63 330 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 FGBP02675 491 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 FAM86B2P0C5J1 330 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 CIITAP33076 1130 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 RFC2P35250 354 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 TRIM71Q2Q1W2 868 aaKnown RBP14.13□□□□□ -0.15
EXT1-202ENST00000436216 RETREG2Q8NC44 543 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 AFAP1L1Q8TED9 768 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 AGO4Q9HCK5 861 aaKnown RBP14.13□□□□□ -0.15
EXT1-202ENST00000436216 STK36Q9NRP7 1315 aa14.13□□□□□ -0.15
EXT1-202ENST00000436216 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.12□□□□□ -0.15
EXT1-202ENST00000436216 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.12□□□□□ -0.15
EXT1-202ENST00000436216 M0R2N6 131 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 LGR5O75473 907 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 CDKL5O76039 1030 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 ATG7O95352 703 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 SMIM10L2AP0DMW4 78 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 SMIM10L2BP0DMW5 78 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 CKBP12277 381 aa14.12□□□□□ -0.15
EXT1-202ENST00000436216 TCF7P36402 384 aaPredicted RBP14.12□□□□□ -0.15
EXT1-202ENST00000436216 NEK4P51957 841 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms