RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 MBD3O95983 291 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 LIG1P18858 919 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 NDUFA8P51970 172 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 PRKCZQ05513 592 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 SPIRE1Q08AE8 756 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 PPP2R5CQ13362 524 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 SNW1Q13573 536 aaKnown RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 NEDD9Q14511 834 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 IQSEC1Q6DN90 963 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 FBXO16Q8IX29 292 aaPredicted RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 SCFD2Q8WU76 684 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 APBA2Q99767 749 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 MMTAG2Q9BU76 263 aaKnown RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 GOLPH3LQ9H4A5 285 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 TSKSQ9UJT2 592 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 KCNH3Q9ULD8 1083 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
AC004448.3-201ENST00000435953 PCNTO95613 3336 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 NFASCO94856 1347 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 POTEMA6NI47 508 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 EML1O00423 815 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 SLC26A4O43511 780 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 TXNP10599 105 aaKnown RBP11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 PFKFB1P16118 471 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 CYP2C19P33261 490 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 FAM160A1Q05DH4 1040 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 IRF5Q13568 498 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 EPHA7Q15375 998 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 LY6KQ17RY6 165 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 NCAPH2Q6IBW4 605 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 CABP7Q86V35 215 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 UNC45AQ9H3U1 944 aa11.12□□□□□ -0.63
AC004448.3-201ENST00000435953 DDX39AO00148 427 aaKnown RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 POLR2DO15514 142 aaKnown RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 NR1I2O75469 434 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 ZNF202O95125 648 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 ARIH2O95376 493 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 CCNE2O96020 404 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 TXLNAP40222 546 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 SYKP43405 635 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 PRMT2P55345 433 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 KRT76Q01546 638 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 ZNF746Q6NUN9 644 aaPredicted RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 ERMNQ8TAM6 284 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 HSD17B14Q9BPX1 270 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 EIF2AK1Q9BQI3 630 aaKnown RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 POLR3CQ9BUI4 534 aaPredicted RBP11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 MLXIPQ9HAP2 919 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 DISC1Q9NRI5 854 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 DACT1Q9NYF0 836 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 CCDC39Q9UFE4 941 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 NRBP1Q9UHY1 535 aa11.11□□□□□ -0.63
AC004448.3-201ENST00000435953 A0A087X0B3 334 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 CHMP2AO43633 222 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 SLITRK3O94933 977 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 GGPS1O95749 300 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 SPATA31C1P0DKV0 1188 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 RPA1P27694 616 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 SFNP31947 248 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 CCT6AP40227 531 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 ADCYAP1R1P41586 468 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 KARSQ15046 597 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 ZRSR1Q15695 479 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 CCDC144BQ3MJ40 725 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 LONRF3Q496Y0 759 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 RRAGBQ5VZM2 374 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 METTL7BQ6UX53 244 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 CATSPER3Q86XQ3 398 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 PDILTQ8N807 584 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 RDM1Q8NG50 284 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 SNX29Q8TEQ0 813 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 CALML4Q96GE6 196 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 TIGD1Q96MW7 591 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 PNMA5Q96PV4 448 aa11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 PYM1Q9BRP8 204 aaKnown RBP11.1□□□□□ -0.63
AC004448.3-201ENST00000435953 JPH1Q9HDC5 661 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms