RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 RAD21O60216 631 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 ZBTB7AO95365 584 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 LCA5LO95447 670 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 DPEP1P16444 411 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 KIF5AQ12840 1032 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 SPA17Q15506 151 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 POTEBQ6S5H4 581 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 NOA1Q8NC60 698 aaKnown RBP20.6■□□□□ 0.89
CLK1-205ENST00000434813 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 AMNQ9BXJ7 453 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 MMRN2Q9H8L6 949 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 PCDHA2Q9Y5H9 948 aa20.6■□□□□ 0.89
CLK1-205ENST00000434813 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
CLK1-205ENST00000434813 SSBP05455 408 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLK1-205ENST00000434813 CYP27A1Q02318 531 aa20.59■□□□□ 0.89
CLK1-205ENST00000434813 HAUS3Q68CZ6 603 aa20.59■□□□□ 0.89
CLK1-205ENST00000434813 ETNPPLQ8TBG4 499 aa20.59■□□□□ 0.89
CLK1-205ENST00000434813 BAP1Q92560 729 aa20.59■□□□□ 0.89
CLK1-205ENST00000434813 HDAC6Q9UBN7 1215 aa20.59■□□□□ 0.89
CLK1-205ENST00000434813 FRMD3A2A2Y4 597 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 F5H6K3 240 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 TBX3O15119 743 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 PLEKP08567 350 aaPredicted RBP20.58■□□□□ 0.89
CLK1-205ENST00000434813 RHOXF2BP0C7M4 288 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 CYP11B2P19099 503 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 ARHGAP4P98171 946 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 KLRC3Q07444 240 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 SMC1AQ14683 1233 aaKnown RBP20.58■□□□□ 0.89
CLK1-205ENST00000434813 GPBP1Q86WP2 473 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 MSL3Q8N5Y2 521 aaKnown RBP20.58■□□□□ 0.89
CLK1-205ENST00000434813 SECISBP2LQ93073 1101 aaKnown RBP20.58■□□□□ 0.89
CLK1-205ENST00000434813 RPGRIP1Q96KN7 1286 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 RHOXF2Q9BQY4 288 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 GBP3Q9H0R5 595 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 PITPNM2Q9BZ72 1349 aa20.58■□□□□ 0.89
CLK1-205ENST00000434813 LRRC53A6NM62 1247 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 GNA14O95837 355 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 KIF11P52732 1056 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 MARSP56192 900 aaKnown RBP20.58■□□□□ 0.88
CLK1-205ENST00000434813 CKAP4Q07065 602 aaKnown RBP20.58■□□□□ 0.88
CLK1-205ENST00000434813 SPIRE1Q08AE8 756 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 MTFR1LQ9H019 292 aa20.58■□□□□ 0.88
CLK1-205ENST00000434813 ZHX1Q9UKY1 873 aaPredicted RBP20.58■□□□□ 0.88
CLK1-205ENST00000434813 NDUFB10O96000 172 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 POLD1P28340 1107 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 MMP14P50281 582 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 VSNL1P62760 191 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 Q4G0T1 1027 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 WDR93Q6P2C0 686 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 ZC3H3Q8IXZ2 948 aaKnown RBP20.57■□□□□ 0.88
CLK1-205ENST00000434813 PSMD1Q99460 953 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 P2RX7Q99572 595 aaKnown RBP20.57■□□□□ 0.88
CLK1-205ENST00000434813 FGFBP2Q9BYJ0 223 aa20.57■□□□□ 0.88
CLK1-205ENST00000434813 IFIH1Q9BYX4 1025 aaKnown RBP20.57■□□□□ 0.88
CLK1-205ENST00000434813 TRAF5O00463 557 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
CLK1-205ENST00000434813 MED24O75448 989 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 GDF11O95390 407 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 OAS2P29728 719 aaKnown RBP20.56■□□□□ 0.88
CLK1-205ENST00000434813 SLC12A3P55017 1021 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 PDXDC1Q6P996 788 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 KRT26Q7Z3Y9 468 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 FBXO11Q86XK2 927 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 NEK11Q8NG66 645 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 SH2D4AQ9H788 454 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 DUSP10Q9Y6W6 482 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 MACROD2A1Z1Q3 448 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
CLK1-205ENST00000434813 KCNA3P22001 575 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 SREBF1P36956 1147 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 STAT3P40763 770 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 CCDC40Q4G0X9 1142 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 SYDE2Q5VT97 1194 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 RRAGAQ7L523 313 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 TRIM58Q8NG06 486 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 ERMNQ8TAM6 284 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 KCTD10Q9H3F6 313 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 ABCB6Q9NP58 842 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 PCDHA13Q9Y5I0 950 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 ATAD5Q96QE3 1844 aa20.56■□□□□ 0.88
CLK1-205ENST00000434813 ENTPD3O75355 529 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 EIF4A3P38919 411 aaKnown RBP20.55■□□□□ 0.88
CLK1-205ENST00000434813 KCNMA1Q12791 1236 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 HDXQ7Z353 690 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 TRIM59Q8IWR1 403 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 LENG9Q96B70 501 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 MMS19Q96T76 1030 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 TANGO6Q9C0B7 1094 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 DEF6Q9H4E7 631 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 CEP72Q9P209 647 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 L1RE1Q9UN81 338 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 STK24Q9Y6E0 443 aa20.55■□□□□ 0.88
CLK1-205ENST00000434813 POTEFA5A3E0 1075 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 MAPK8IP2Q13387 824 aaPredicted RBP20.54■□□□□ 0.88
CLK1-205ENST00000434813 PRR16Q569H4 304 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 HERC4Q5GLZ8 1057 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms