RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 MSCO60682 206 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 PF4V1P10720 104 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 RECQLP46063 649 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-212ENST00000434424 PURAQ00577 322 aaKnown RBP9.22□□□□□ -0.93
PTPRK-212ENST00000434424 KIZQ2M2Z5 673 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 IQCEQ6IPM2 695 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 PNMA8AQ86V59 439 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-212ENST00000434424 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 CPA6Q8N4T0 437 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 FCRL3Q96P31 734 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-212ENST00000434424 GIT1Q9Y2X7 761 aa9.22□□□□□ -0.93
PTPRK-212ENST00000434424 CFBP00751 764 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 PLS3P13797 630 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 CTSKP43235 329 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 DNM2P50570 870 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 MECP2P51608 486 aaKnown RBP9.21□□□□□ -0.94
PTPRK-212ENST00000434424 JAG1P78504 1218 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 ST5P78524 1137 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 PCBP2Q15366 365 aaKnown RBP eCLIP9.21□□□□□ -0.94
PTPRK-212ENST00000434424 CLEC16AQ2KHT3 1053 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 TMEM240Q5SV17 173 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 ZNF765Q7L2R6 523 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 CCDC103Q8IW40 242 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.94
PTPRK-212ENST00000434424 SLC5A5Q92911 643 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 IL17RAQ96F46 866 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 SCYL1Q96KG9 808 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 CLEC1BQ9P126 229 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.94
PTPRK-212ENST00000434424 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 CCDC66A2RUB6 948 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 ARNTLO00327 626 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 CBX7O95931 251 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 LCP1P13796 627 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 TRIM27P14373 513 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 IFNGR1P15260 489 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 CYP2C19P33261 490 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 KIR3DL1P43629 444 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 CDK5R2Q13319 367 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 ARHGAP44Q17R89 818 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 C4orf46Q504U0 113 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 SFRP5Q5T4F7 317 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 TMED8Q6PL24 325 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-212ENST00000434424 SEZ6L2Q6UXD5 910 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 OVCH1Q7RTY7 1134 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 CLRN3Q8NCR9 226 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 C1orf162Q8NEQ5 155 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-212ENST00000434424 FLCNQ8NFG4 579 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 PANK1Q8TE04 598 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 FBXW5Q969U6 566 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 FAXDC2Q96IV6 333 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 Q96M66 194 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 LRRC4CQ9HCJ2 640 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 PRDM5Q9NQX1 630 aaPredicted RBP9.2□□□□□ -0.94
PTPRK-212ENST00000434424 RCAN3Q9UKA8 241 aa9.2□□□□□ -0.94
PTPRK-212ENST00000434424 FZD9O00144 591 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 DYNC1LI2O43237 492 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-212ENST00000434424 SOD2P04179 222 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 NBPF7P0C2Y1 421 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-212ENST00000434424 DDB1Q16531 1140 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 PGM2L1Q6PCE3 622 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 WFDC3Q8IUB2 231 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 POU5F2Q8N7G0 328 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 DAGLBQ8NCG7 672 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 CLIP3Q96DZ5 547 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 ARPC5LQ9BPX5 153 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 HDAC8Q9BY41 377 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 C1GALT1Q9NS00 363 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 GPATCH2Q9NW75 528 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 C14orf119Q9NWQ9 140 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 MRFAP1Q9Y605 127 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 GLI2P10070 1586 aa9.19□□□□□ -0.94
PTPRK-212ENST00000434424 IFRD1O00458 451 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-212ENST00000434424 WNT9AO14904 365 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
PTPRK-212ENST00000434424 RBP3P10745 1247 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 VCAM1P19320 739 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 KRT85P78386 507 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 GTF2H3Q13889 308 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 EEF1DP3Q658K8 133 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 RCSD1Q6JBY9 416 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 C16orf59Q7L2K0 433 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 ZNF655Q8N720 491 aaPredicted RBP9.18□□□□□ -0.94
PTPRK-212ENST00000434424 USP33Q8TEY7 942 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 ASIC4Q96FT7 647 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 UACAQ9BZF9 1416 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 OXSMQ9NWU1 459 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 MKS1Q9NXB0 559 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
PTPRK-212ENST00000434424 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
PTPRK-212ENST00000434424 FAM47E-STBD1D6RA91 191 aa9.17□□□□□ -0.94
PTPRK-212ENST00000434424 C8AP07357 584 aa9.17□□□□□ -0.94
PTPRK-212ENST00000434424 BMP8BP34820 402 aa9.17□□□□□ -0.94
PTPRK-212ENST00000434424 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
PTPRK-212ENST00000434424 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
PTPRK-212ENST00000434424 EFHBQ8N7U6 833 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms