RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 ADCYAP1R1P41586 468 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 TRIM32Q13049 653 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-204ENST00000434233 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 FBXO46Q6PJ61 603 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-204ENST00000434233 TRPV1Q8NER1 839 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-204ENST00000434233 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 TEKT3Q9BXF9 490 aa13.91□□□□□ -0.18
LINC00339-204ENST00000434233 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-204ENST00000434233 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 SEPT4O43236 478 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 GAS7O60861 476 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 INHAP05111 366 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 AKR1A1P14550 325 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 SMPD1P17405 629 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 TECP42680 631 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 IL17AQ16552 155 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 TMEM266Q2M3C6 531 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 B3GNT9Q6UX72 402 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
LINC00339-204ENST00000434233 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
LINC00339-204ENST00000434233 ELP1O95163 1332 aa13.9□□□□□ -0.19
LINC00339-204ENST00000434233 CUTAO60888 179 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 GGPS1O95749 300 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 GH1P01241 217 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 KRT76Q01546 638 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 GJA10Q969M2 543 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 RAB34Q9BZG1 259 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 HMX1Q9NP08 348 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-204ENST00000434233 PKD2L1Q9P0L9 805 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
LINC00339-204ENST00000434233 VWA3AA6NCI4 1184 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 DUSP11O75319 330 aaKnown RBP13.88□□□□□ -0.19
LINC00339-204ENST00000434233 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-204ENST00000434233 ATG7O95352 703 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 CNGA1P29973 690 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-204ENST00000434233 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 ADALQ6DHV7 355 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 COPS5Q92905 334 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 AK8Q96MA6 479 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 JPH1Q9HDC5 661 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-204ENST00000434233 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
LINC00339-204ENST00000434233 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-204ENST00000434233 MSCO60682 206 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 SFNP31947 248 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 ME1P48163 572 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 EPHA7Q15375 998 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 AXDND1Q5T1B0 1012 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-204ENST00000434233 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-204ENST00000434233 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 CLIC6Q96NY7 704 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
LINC00339-204ENST00000434233 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
LINC00339-204ENST00000434233 ADCY6O43306 1168 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 CCNE2O96020 404 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 RARBP10826 455 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 JAK3P52333 1124 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 NKX3-2P78367 333 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 GRIN1Q05586 938 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 MIER3Q7Z3K6 550 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 OR6J1Q8NGC5 347 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 AP5M1Q9H0R1 490 aa13.86□□□□□ -0.19
LINC00339-204ENST00000434233 CSRNP2Q9H175 543 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms