RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 IL23AQ9NPF7 189 aa15.1■□□□□ 0.01
TRAPPC4-202ENST00000434101 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
TRAPPC4-202ENST00000434101 GTF2IRD1Q9UHL9 959 aa15.1■□□□□ 0.01
TRAPPC4-202ENST00000434101 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
TRAPPC4-202ENST00000434101 PITPNM1O00562 1244 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 LGALS2P05162 132 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 ITGB5P18084 799 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 SREBF1P36956 1147 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 CLK2P49760 499 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 CCL23P55773 120 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 SSRP1Q08945 709 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 ANKRD1Q15327 319 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 REXO1Q8N1G1 1221 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■□□□ 14
TRAPPC4-202ENST00000434101 MXRA8Q9BRK3 442 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 UMODL1Q5DID0 1318 aa15.09■□□□□ 0.01
TRAPPC4-202ENST00000434101 H3BRB1 525 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 PFKMP08237 780 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 KCNA2P16389 499 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 ZNF76P36508 570 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 TMEM240Q5SV17 173 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 JAKMIP3Q5VZ66 844 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 GDF6Q6KF10 455 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-202ENST00000434101 CAGE1Q8TC20 777 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 IL17RAQ96F46 866 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 PGBD1Q96JS3 809 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 GPR20Q99678 358 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 C16orf70Q9BSU1 422 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 WNT8AQ9H1J5 351 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 TUT1Q9H6E5 874 aaKnown RBP15.08■□□□□ 0
TRAPPC4-202ENST00000434101 BCAS3Q9H6U6 928 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 SH3GLB2Q9NR46 395 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 TMEM260Q9NX78 707 aa15.08■□□□□ 0
TRAPPC4-202ENST00000434101 ZNF215Q9UL58 517 aaPredicted RBP15.08■□□□□ 0
TRAPPC4-202ENST00000434101 LAMA3Q16787 3333 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 TET1Q8NFU7 2136 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 CDKL5O76039 1030 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 DEXIO95424 95 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 ACRP10323 421 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 RFC2P35250 354 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 SMAD3P84022 425 aaKnown RBP15.07■□□□□ 0
TRAPPC4-202ENST00000434101 ARHGAP4P98171 946 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 SP4Q02446 784 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 STK3Q13188 491 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 CEP55Q53EZ4 464 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 ZNF365Q70YC5 407 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
TRAPPC4-202ENST00000434101 SLKQ9H2G2 1235 aaPredicted RBP15.07■□□□□ 0
TRAPPC4-202ENST00000434101 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
TRAPPC4-202ENST00000434101 MYH9P35579 1960 aaKnown RBP15.07■□□□□ 0
TRAPPC4-202ENST00000434101 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 ATP9AO75110 1047 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 PPFIA3O75145 1194 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 FGBP02675 491 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 C16orf59Q7L2K0 433 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 NIPA1Q7RTP0 329 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 AFAP1L1Q8TED9 768 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 SEPT1Q8WYJ6 367 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 HERVK_113Q902F9 699 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 SCLYQ96I15 445 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 SDF4Q9BRK5 362 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 JPH1Q9HDC5 661 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-202ENST00000434101 PKD2L1Q9P0L9 805 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 VPS54Q9P1Q0 977 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 NFASCO94856 1347 aa15.06■□□□□ 0
TRAPPC4-202ENST00000434101 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 MEIS1O00470 390 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 PARNO95453 639 aaKnown RBP15.05■□□□□ -0
TRAPPC4-202ENST00000434101 CYP3A4P08684 503 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 IQCF3P0C7M6 154 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 GNAT1P11488 350 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 TCF7P36402 384 aaPredicted RBP15.05■□□□□ -0
TRAPPC4-202ENST00000434101 NLRP5P59047 1200 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 PTK7Q13308 1070 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 DEFB123Q8N688 67 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 SLC9A2Q9UBY0 812 aa15.05■□□□□ -0
TRAPPC4-202ENST00000434101 PFKFB2O60825 505 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 SMIM10L2AP0DMW4 78 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 SMIM10L2BP0DMW5 78 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 ACTN1P12814 892 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 SELPP16109 830 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 AK2P54819 239 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 SETQ01105 290 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-202ENST00000434101 RBL2Q08999 1139 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 SCRN1Q12765 414 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 ZNF697Q5TEC3 545 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 RASIP1Q5U651 963 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 PLA2G4DQ86XP0 818 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 CYP2W1Q8TAV3 490 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 CTAGE1Q96RT6 745 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 C22orf23Q9BZE7 217 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 TPCN1Q9ULQ1 816 aa15.04■□□□□ -0
TRAPPC4-202ENST00000434101 WDR81Q562E7 1941 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms