RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 SPATA31C2B4DYI2 1134 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 PRC1O43663 620 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 AMHP03971 560 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 LGALS2P05162 132 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 ANTXR2P58335 489 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 GPNMBQ14956 572 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 SLC35G1Q2M3R5 365 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 TRIM71Q2Q1W2 868 aaKnown RBP17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 PCNX4Q63HM2 1172 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 LY9Q9HBG7 655 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 MUC3AQ02505 3323 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 CHD7Q9P2D1 2997 aa17.13■□□□□ 0.33
RPUSD3-208ENST00000433972 SORBS3O60504 671 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 SMIM10L2AP0DMW4 78 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 SMIM10L2BP0DMW5 78 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 HOXC8P31273 242 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 LIFRP42702 1097 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 DEFB103AP81534 67 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 CYFIP1Q7L576 1253 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 PIBF1Q8WXW3 757 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 TGS1Q96RS0 853 aaKnown RBP17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
RPUSD3-208ENST00000433972 MYH6P13533 1939 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 RFXAPO00287 272 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 TEX2Q8IWB9 1127 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 SEPT8Q92599 483 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 GPR20Q99678 358 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 EHMT1Q9H9B1 1298 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 SLC12A7Q9Y666 1083 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
RPUSD3-208ENST00000433972 GBF1Q92538 1859 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 GRB10Q13322 594 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 TRAF7Q6Q0C0 670 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 APBB2Q92870 758 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 HLA-CQ95604 372 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 RNPEPQ9H4A4 650 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
RPUSD3-208ENST00000433972 XIRP2A4UGR9 3374 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 EPOPA6NHQ4 379 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 SPDYE3A6NKU9 549 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 MAFGO15525 162 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 ERVK-21P61565 698 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 DBF4BQ8NFT6 615 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 WNT8BQ93098 351 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
RPUSD3-208ENST00000433972 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 MEIS2O14770 477 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 TREHO43280 583 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 ARHGEF15O94989 841 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 MBTPS1Q14703 1052 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 TAF2Q6P1X5 1199 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 RSPH3Q86UC2 560 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 TTC28Q96AY4 2481 aa17.08■□□□□ 0.32
RPUSD3-208ENST00000433972 LINC01553A4QN01 128 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 SLC27A2O14975 620 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 BMP1P13497 986 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 SEMA3FQ13275 785 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 HIC1Q14526 733 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 UTP14CQ5TAP6 766 aaKnown RBP17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 SRBD1Q8N5C6 995 aaKnown RBP17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 RBM28Q9NW13 759 aaKnown RBP17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 ERAP1Q9NZ08 941 aa17.07■□□□□ 0.32
RPUSD3-208ENST00000433972 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 REC8O95072 547 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 PLEKHA8P1O95397 391 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 SP4Q02446 784 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 TFF2Q03403 129 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 MTMR1Q13613 665 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 PTPROQ16827 1216 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 FAM117BQ6P1L5 589 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 TMCO2Q7Z6W1 182 aaPredicted RBP17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 RPAINQ86UA6 219 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 FBXO22Q8NEZ5 403 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 GDPD5Q8WTR4 605 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 SEPT1Q8WYJ6 367 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 YME1L1Q96TA2 773 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms