RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 CCDC122Q5T0U0 273 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 CCDC65Q8IXS2 484 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 SCFD1Q8WVM8 642 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 KCTD10Q9H3F6 313 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 ARHGAP20Q9P2F6 1191 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 HERC5Q9UII4 1024 aaKnown RBP18.85■□□□□ 0.61
CTSD-204ENST00000433655 VAV3Q9UKW4 847 aa18.85■□□□□ 0.61
CTSD-204ENST00000433655 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 KCNMA1Q12791 1236 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 EZH2Q15910 746 aaKnown RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 WHAMMP3Q1A5X7 153 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 RSBN1LQ6PCB5 846 aaPredicted RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 ZC3H3Q8IXZ2 948 aaKnown RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 ACER1Q8TDN7 264 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 BAP1Q92560 729 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 GMLQ99445 158 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.84■□□□□ 0.613e-9■■■■□ 25.5
CTSD-204ENST00000433655 BMP2KQ9NSY1 1161 aaPredicted RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 SPDYE3A6NKU9 549 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 MSH4O15457 936 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 PLA2G4AP47712 749 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 FKBP3Q00688 224 aaKnown RBP18.84■□□□□ 0.61
CTSD-204ENST00000433655 RAD51AP2Q09MP3 1159 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 HAUS3Q68CZ6 603 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 NCAPH2Q6IBW4 605 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 TRAPPC11Q7Z392 1133 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 CYP2W1Q8TAV3 490 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 MYO6Q9UM54 1294 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 PITPNM2Q9BZ72 1349 aa18.84■□□□□ 0.61
CTSD-204ENST00000433655 TBC1D8O95759 1140 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 CYP3A4P08684 503 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 RPA1P27694 616 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 CYP27A1Q02318 531 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 KIAA1328Q86T90 577 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 NELFCDQ8IXH7 590 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 ST7Q9NRC1 585 aa18.83■□□□□ 0.61
CTSD-204ENST00000433655 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.61
CTSD-204ENST00000433655 TRAF5O00463 557 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 MEIS1O00470 390 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 SASH3O75995 380 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 ATP1A1P05023 1023 aaKnown RBP18.83■□□□□ 0.6
CTSD-204ENST00000433655 HERC4Q5GLZ8 1057 aaPredicted RBP18.83■□□□□ 0.6
CTSD-204ENST00000433655 KRT26Q7Z3Y9 468 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 CCDC84Q86UT8 332 aaPredicted RBP18.83■□□□□ 0.6
CTSD-204ENST00000433655 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 FAM20AQ96MK3 541 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 CEP63Q96MT8 703 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 PDGFDQ9GZP0 370 aaPredicted RBP18.83■□□□□ 0.6
CTSD-204ENST00000433655 MMRN2Q9H8L6 949 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 TMX2Q9Y320 296 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.6
CTSD-204ENST00000433655 IGLV3-22A0A075B6J6 115 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 ENC1O14682 589 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 RXRBP28702 533 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 CASP5P51878 434 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 MARSP56192 900 aaKnown RBP18.82■□□□□ 0.6
CTSD-204ENST00000433655 DMTNQ08495 405 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 GIT2Q14161 759 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 SYT2Q8N9I0 419 aaPredicted RBP18.82■□□□□ 0.6
CTSD-204ENST00000433655 CAMKK2Q96RR4 588 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 EMILIN3Q9NT22 766 aa18.82■□□□□ 0.6
CTSD-204ENST00000433655 RAD17O75943 681 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 LCA5LO95447 670 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
CTSD-204ENST00000433655 STAT2P52630 851 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 VAV2P52735 878 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 PAPD7Q5XG87 772 aaKnown RBP18.81■□□□□ 0.6
CTSD-204ENST00000433655 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
CTSD-204ENST00000433655 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 PNKPQ96T60 521 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.81■□□□□ 0.6
CTSD-204ENST00000433655 ZBTB21Q9ULJ3 1066 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 KRT86O43790 486 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 EN1Q05925 392 aaPredicted RBP18.81■□□□□ 0.6
CTSD-204ENST00000433655 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.63e-14■■■■■ 35
CTSD-204ENST00000433655 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 PDXDC1Q6P996 788 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 TRIM59Q8IWR1 403 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 ARHGEF10LQ9HCE6 1279 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 RAB21Q9UL25 225 aa18.81■□□□□ 0.6
CTSD-204ENST00000433655 EML1O00423 815 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 NOL4O94818 638 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 GABPB1Q06547 395 aaPredicted RBP18.8■□□□□ 0.6
CTSD-204ENST00000433655 CCDC40Q4G0X9 1142 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 RRAGAQ7L523 313 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 NOA1Q8NC60 698 aaKnown RBP18.8■□□□□ 0.6
CTSD-204ENST00000433655 ERMNQ8TAM6 284 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 CCDC42Q96M95 316 aa18.8■□□□□ 0.6
CTSD-204ENST00000433655 REEP2Q9BRK0 252 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms