RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 MKI67P46013 3256 aaKnown RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 FOSP01100 380 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 MRPL44Q9H9J2 332 aaKnown RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 A1CFQ9NQ94 594 aaKnown RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 HOXC10Q9NYD6 342 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 DACH1Q9UI36 760 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ECM29Q5VYK3 1845 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 PSMA7O14818 248 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 FAM13AO94988 1023 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 KIF20AO95235 890 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 PDXDC2PQ6P474 469 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 TRIM9Q9C026 710 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
SMPD4-205ENST00000431183 GPRC5CQ9NQ84 441 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ZNF536O15090 1300 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ESYT2A0FGR8 921 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 ZBTB10Q96DT7 871 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 KIFC3Q9BVG8 833 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 SUGCTQ9HAC7 445 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 TXNRD2Q9NNW7 524 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 PGAP2Q9UHJ9 254 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 RABGAP1Q9Y3P9 1069 aa12.56□□□□□ -0.4
SMPD4-205ENST00000431183 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 NID2Q14112 1375 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 HTRA3P83110 453 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 UBXN1Q04323 297 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 XKR9Q5GH70 373 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 C2orf69Q8N8R5 385 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 ANKRD20A12PQ8NF67 263 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-205ENST00000431183 DCAF17Q5H9S7 520 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-205ENST00000431183 FAM102BQ5T8I3 360 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 TIGD1Q96MW7 591 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 LXNQ9BS40 222 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 TEKT3Q9BXF9 490 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMPD4-205ENST00000431183 HERVK_113P62684 666 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 MORC3Q14149 939 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 SWSAP1Q6NVH7 229 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 MLKLQ8NB16 471 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 CACTINQ8WUQ7 758 aaKnown RBP12.55□□□□□ -0.4
SMPD4-205ENST00000431183 GLG1Q92896 1179 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 MTMR9Q96QG7 549 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 PCIF1Q9H4Z3 704 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 IVNS1ABPQ9Y6Y0 642 aa12.55□□□□□ -0.4
SMPD4-205ENST00000431183 hCG_1984214I3L0E3 225 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SKILP12757 684 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 DSG3P32926 999 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 CDR1P51861 262 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-205ENST00000431183 KCNA1Q09470 495 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 KCTD2Q14681 263 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 HAUS3Q68CZ6 603 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-205ENST00000431183 PORCNQ9H237 461 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 GBA2Q9HCG7 927 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-205ENST00000431183 BLOC1S4Q9NUP1 217 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 AFG3L2Q9Y4W6 797 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 NMT1P30419 496 aaKnown RBP12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SREBF1P36956 1147 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 E2F4Q16254 413 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 UVSSAQ2YD98 709 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 TMEM63BQ5T3F8 832 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 RUSC1Q9BVN2 902 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 NKRFO15226 690 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■□□□ 14.5
SMPD4-205ENST00000431183 CYP2J2P51589 502 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 PPP1R18Q6NYC8 613 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 DPP9Q86TI2 863 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 SLFN12Q8IYM2 578 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 RAD54LQ92698 747 aa12.54□□□□□ -0.4
SMPD4-205ENST00000431183 TPM3P06753 285 aa12.53□□□□□ -0.4
SMPD4-205ENST00000431183 NOVP48745 357 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms