RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 SGK1O00141 431 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 WDR46O15213 610 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TSC22D2O75157 780 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 KCNA6P17658 529 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 S100A1P23297 94 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 G0S2P27469 103 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 USP11P51784 963 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PPIDQ08752 370 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 MAP3K12Q12852 859 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CLVS2Q5SYC1 327 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 BNC2Q6ZN30 1099 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 RAPH1Q70E73 1250 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TPH2Q8IWU9 490 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 NELFCDQ8IXH7 590 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TTC5Q8N0Z6 440 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PREBQ9HCU5 417 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC177Q9NQR7 707 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 AGPAT3Q9NRZ7 376 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TYW1Q9NV66 732 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TMOD2Q9NZR1 351 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 HPCAL4Q9UM19 191 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 EXOC6BQ9Y2D4 811 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC61Q9Y6R9 512 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PEG3Q9GZU2 1588 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 FAM170AA1A519 330 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 MEN1O00255 615 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CHL1O00533 1208 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 BAIAP3O94812 1187 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 GZMAP12544 262 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 FOSL2P15408 326 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TARSP26639 723 aaKnown RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 ETV3P41162 512 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PCYT1AP49585 367 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 NLRP5P59047 1200 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 BEX3Q00994 111 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 COTL1Q14019 142 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 COL9A2Q14055 689 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 MAP3K11Q16584 847 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 CLPPQ16740 277 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TSGA10IPQ3SY00 556 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 USP37Q86T82 979 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 ESX1Q8N693 406 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 ST13P5Q8NFI4 369 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TTC8Q8TAM2 541 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-203ENST00000430976 TINF2Q9BSI4 451 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 PSTPIP2Q9H939 334 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 KBTBD4Q9NVX7 518 aa5.83□□□□□ -1.48
PTPN4-203ENST00000430976 DHX57Q6P158 1386 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 TRAV6A0A075B6T7 132 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ESYT3A0FGR9 886 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 A8MX80 341 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 NUDT19A8MXV4 375 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 HNRNPRO43390 633 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 HSPA4LO95757 839 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SLC5A1P13866 664 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 CDH3P22223 829 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 MTTPP55157 894 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 XRRA1Q6P2D8 792 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 KDELC1Q6UW63 502 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ENOSF1Q7L5Y1 443 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 GALNT7Q86SF2 657 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 GLYCTKQ8IVS8 523 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ARID3BQ8IVW6 561 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 FAM133AQ8N9E0 248 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ADAMTS19Q8TE59 1207 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 RPRD1AQ96P16 312 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 MRPL46Q9H2W6 279 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 POLMQ9NP87 494 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ENAMQ9NRM1 1142 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 EHD2Q9NZN4 543 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ZRANB1Q9UGI0 708 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 HMGXB3Q12766 1538 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 NOTOA8MTQ0 251 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ST18O60284 1047 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SEMA3DO95025 777 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 MT-ND3P03897 115 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 PDE6AP16499 860 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 RPL13P26373 211 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 PTPN5P54829 565 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 MDM2Q00987 491 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 FKBP4Q02790 459 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 GOLGA8FQ08AF8 430 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 GOLGA8DPQ0D2H9 430 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 DHX34Q14147 1143 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 KLHL40Q2TBA0 621 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 EAPPQ56P03 285 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 RIC3Q7Z5B4 369 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 CEP97Q8IW35 865 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 MAP7D3Q8IWC1 876 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 C7orf61Q8IZ16 206 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SYCE1Q8N0S2 351 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 NUP93Q8N1F7 819 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 CEP112Q8N8E3 955 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 FAM200AQ8TCP9 573 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 DPF3Q92784 378 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 NRBF2Q96F24 287 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 APBA2Q99767 749 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms