RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
HDAC6-207ENST00000430858 C16orf70Q9BSU1 422 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-207ENST00000430858 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 SH3GLB2Q9NR46 395 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 GTF2IRD1Q9UHL9 959 aa11.22□□□□□ -0.61
HDAC6-207ENST00000430858 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 PPFIA3O75145 1194 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 CDKL5O76039 1030 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 DEXIO95424 95 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 KCNA2P16389 499 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 CCL23P55773 120 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 STK3Q13188 491 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 BFSP2Q13515 415 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 PTGISQ16647 500 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 CEP55Q53EZ4 464 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 GDF6Q6KF10 455 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-207ENST00000430858 PSRC1Q6PGN9 363 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-207ENST00000430858 FAM177A1Q8N128 213 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-207ENST00000430858 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.61
HDAC6-207ENST00000430858 PPP1R13LQ8WUF5 828 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.61
HDAC6-207ENST00000430858 ALG1Q9BT22 464 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 TMEM260Q9NX78 707 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
HDAC6-207ENST00000430858 H3BRB1 525 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 ATP9AO75110 1047 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 SEC24BO95487 1268 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 LGALS2P05162 132 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 PFKMP08237 780 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 CYP3A4P08684 503 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF76P36508 570 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 ARHGAP4P98171 946 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 SCRN1Q12765 414 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 TMEM240Q5SV17 173 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 NIPA1Q7RTP0 329 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 RPUSD2Q8IZ73 545 aaKnown RBP11.2□□□□□ -0.62
HDAC6-207ENST00000430858 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.622e-8■□□□□ 9.3
HDAC6-207ENST00000430858 WNT8AQ9H1J5 351 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 TUT1Q9H6E5 874 aaKnown RBP11.2□□□□□ -0.62
HDAC6-207ENST00000430858 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 KCNH7Q9NS40 1196 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 VPS54Q9P1Q0 977 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-207ENST00000430858 TPCN1Q9ULQ1 816 aa11.2□□□□□ -0.62
HDAC6-207ENST00000430858 NFASCO94856 1347 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 MEIS1O00470 390 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 PFKFB2O60825 505 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 IQCF3P0C7M6 154 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 ACRP10323 421 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 RFC2P35250 354 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 AK2P54819 239 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 NLRP5P59047 1200 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 SMAD3P84022 425 aaKnown RBP11.19□□□□□ -0.62
HDAC6-207ENST00000430858 SP4Q02446 784 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 RBL2Q08999 1139 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 PTK7Q13308 1070 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 C16orf59Q7L2K0 433 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 AFAP1L1Q8TED9 768 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 SEPT1Q8WYJ6 367 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 SDF4Q9BRK5 362 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 MTIF3Q9H2K0 278 aaKnown RBP11.19□□□□□ -0.62
HDAC6-207ENST00000430858 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-207ENST00000430858 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 LAMA3Q16787 3333 aa11.19□□□□□ -0.62
HDAC6-207ENST00000430858 STK36Q9NRP7 1315 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 C17orf102A2RUQ5 167 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
HDAC6-207ENST00000430858 FGBP02675 491 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 ARP10275 920 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 GNAT1P11488 350 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 TCF7P36402 384 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-207ENST00000430858 NEK4P51957 841 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-207ENST00000430858 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
HDAC6-207ENST00000430858 RASIP1Q5U651 963 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 GALNT17Q6IS24 598 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 PLA2G4DQ86XP0 818 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 SCLYQ96I15 445 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 C22orf23Q9BZE7 217 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 AGO4Q9HCK5 861 aaKnown RBP11.18□□□□□ -0.62
HDAC6-207ENST00000430858 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
HDAC6-207ENST00000430858 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-207ENST00000430858 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-207ENST00000430858 GSTTP1A0A1W2PQM5 241 aa11.17□□□□□ -0.62
HDAC6-207ENST00000430858 FAM86B1E9PN63 330 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms